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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2gnhH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2gnhH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.522
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.520
2gnlH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.517
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.513
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.504
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.500
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.499
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.496
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.495
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.492
4f9b0SYCell division cycle 7-related protein kinase2.7.11.10.492
2gnfY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.490
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.488
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.486
2uw4L15cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.483
4c34STUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.483
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.481
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.481
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.480
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.480
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.479
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.474
4aqc88ATyrosine-protein kinase JAK2/0.474
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.473
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.468
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.466
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.466
3ambVX6cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.465
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.461
1jbpADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.458
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
2pvmP29Casein kinase II subunit alpha2.7.11.10.451
4otiMI1Serine/threonine-protein kinase N1/0.451
4i5cC5ITyrosine-protein kinase JAK1/0.449
5e8ySTUTGF-beta receptor type-22.7.11.300.448
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
3cqwCQWRAC-alpha serine/threonine-protein kinase2.7.11.10.447
3zc6VFCTyrosine-protein kinase JAK32.7.10.20.447
4iacACPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.444
4oh4ANPProtein BRASSINOSTEROID INSENSITIVE 12.7.10.10.444
2jdvL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442
4e6d0NUTyrosine-protein kinase JAK2/0.442
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441
3l9mL9McAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441
4o0wADNAurora kinase A2.7.11.10.441