2.000 Å
X-ray
2007-05-09
Name: | Casein kinase II subunit alpha |
---|---|
ID: | CSK2A_MAIZE |
AC: | P28523 |
Organism: | Zea mays |
Reign: | Eukaryota |
TaxID: | 4577 |
EC Number: | 2.7.11.1 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 22.009 |
---|---|
Number of residues: | 28 |
Including | |
Standard Amino Acids: | 27 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.639 | 931.500 |
% Hydrophobic | % Polar |
---|---|
38.04 | 61.96 |
According to VolSite |
HET Code: | P29 |
---|---|
Formula: | C17H15N9 |
Molecular weight: | 345.361 g/mol |
DrugBank ID: | DB08345 |
Buried Surface Area: | 56.44 % |
Polar Surface area: | 119.6 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 7 |
H-Bond Donors: | 3 |
Rings: | 4 |
Aromatic rings: | 4 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 6 |
X | Y | Z |
---|---|---|
22.1796 | 7.43142 | 21.5278 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C12 | CG1 | VAL- 45 | 3.96 | 0 | Hydrophobic |
C23 | CG2 | VAL- 53 | 3.56 | 0 | Hydrophobic |
C12 | CD1 | ILE- 66 | 3.88 | 0 | Hydrophobic |
C12 | CE1 | TYR- 115 | 3.75 | 0 | Hydrophobic |
N01 | N | VAL- 116 | 3.3 | 139.37 | H-Bond (Protein Donor) |
N10 | O | VAL- 116 | 2.78 | 136.38 | H-Bond (Ligand Donor) |
C11 | CB | ASN- 118 | 4.03 | 0 | Hydrophobic |
C20 | CD1 | ILE- 174 | 3.74 | 0 | Hydrophobic |
N26 | O | HOH- 506 | 2.78 | 179.97 | H-Bond (Protein Donor) |