2.260 Å
X-ray
2008-07-02
Name: | cAMP-dependent protein kinase catalytic subunit alpha |
---|---|
ID: | KAPCA_BOVIN |
AC: | P00517 |
Organism: | Bos taurus |
Reign: | Eukaryota |
TaxID: | 9913 |
EC Number: | 2.7.11.11 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 95 % |
I | 5 % |
B-Factor: | 27.453 |
---|---|
Number of residues: | 22 |
Including | |
Standard Amino Acids: | 21 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.874 | 756.000 |
% Hydrophobic | % Polar |
---|---|
44.20 | 55.80 |
According to VolSite |
HET Code: | LL2 |
---|---|
Formula: | C10H10N2S |
Molecular weight: | 190.265 g/mol |
DrugBank ID: | DB08114 |
Buried Surface Area: | 70.37 % |
Polar Surface area: | 67.14 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 2 |
H-Bond Donors: | 1 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
7.14031 | 9.85792 | 3.96892 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C2 | CB | LEU- 49 | 3.8 | 0 | Hydrophobic |
C8 | CG2 | VAL- 57 | 4.13 | 0 | Hydrophobic |
C2 | CG1 | VAL- 57 | 3.99 | 0 | Hydrophobic |
S4 | CG1 | VAL- 57 | 3.79 | 0 | Hydrophobic |
S4 | CB | ALA- 70 | 3.91 | 0 | Hydrophobic |
N10 | O | GLU- 121 | 2.93 | 135.57 | H-Bond (Ligand Donor) |
C12 | CG | GLU- 127 | 3.7 | 0 | Hydrophobic |
S4 | CD1 | LEU- 173 | 3.77 | 0 | Hydrophobic |
C9 | CD2 | LEU- 173 | 3.8 | 0 | Hydrophobic |
C13 | CG2 | THR- 183 | 3.43 | 0 | Hydrophobic |
C2 | CE1 | PHE- 327 | 4 | 0 | Hydrophobic |