sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4upj | U04 | Gag-Pol polyprotein |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 4upj | U04 | Gag-Pol polyprotein | / | 1.000 | |
| 3upj | U03 | Gag-Pol polyprotein | / | 0.670 | |
| 1mes | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.630 | |
| 1w5v | BE3 | Gag-Pol polyprotein | 3.4.23.16 | 0.630 | |
| 4a6b | QG8 | Gag-Pol polyprotein | 3.4.23.16 | 0.629 | |
| 1d4y | TPV | Gag-Pol polyprotein | 3.4.23.16 | 0.627 | |
| 1hvr | XK2 | Gag-Pol polyprotein | / | 0.623 | |
| 1ec3 | MS3 | Gag-Pol polyprotein | 3.4.23.16 | 0.620 | |
| 3kdd | JZQ | Gag-Pol polyprotein | 3.4.23.16 | 0.618 | |
| 1ec2 | BEJ | Gag-Pol polyprotein | 3.4.23.16 | 0.616 | |
| 1qbs | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.616 | |
| 3s54 | 017 | Protease | / | 0.614 | |
| 1ida | 0PO | Gag-Pol polyprotein | 3.4.23.47 | 0.613 | |
| 1npa | 3NH | Gag-Pol polyprotein | 3.4.23.16 | 0.613 | |
| 1npw | LGZ | Gag-Pol polyprotein | 3.4.23.16 | 0.613 | |
| 2ieo | 017 | Protease | / | 0.613 | |
| 2qhz | MZ2 | Gag-Pol polyprotein | / | 0.611 | |
| 2upj | U02 | Gag-Pol polyprotein | 3.4.23.16 | 0.611 | |
| 1eby | BEB | Gag-Pol polyprotein | 3.4.23.16 | 0.609 | |
| 1wbk | 568 | Pol protein | / | 0.609 | |
| 1ajx | AH1 | Gag-Pol polyprotein | 3.4.23.16 | 0.608 | |
| 1ec0 | BED | Gag-Pol polyprotein | 3.4.23.16 | 0.608 | |
| 2fdd | 385 | Pol protein | / | 0.608 | |
| 3ec0 | GRL | Gag-Pol polyprotein | 3.4.23.47 | 0.608 | |
| 2qnp | QN2 | Gag-Pol polyprotein | 3.4.23.16 | 0.607 | |
| 2xyf | G40 | Gag-Pol polyprotein | / | 0.607 | |
| 1ajv | NMB | Gag-Pol polyprotein | 3.4.23.16 | 0.606 | |
| 1hpo | UNI | Gag-Pol polyprotein | 3.4.23.16 | 0.606 | |
| 1wbm | BLL | Pol protein | / | 0.606 | |
| 2a4f | AAU | V-1 protease | / | 0.606 | |
| 2avs | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.606 | |
| 2xye | CXG | Gag-Pol polyprotein | / | 0.606 | |
| 3vfa | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.606 | |
| 6upj | NIU | Gag-Pol polyprotein | / | 0.606 | |
| 1bdq | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.605 | |
| 1d4s | TPV | Gag-Pol polyprotein | 3.4.23.16 | 0.605 | |
| 1ebz | BEC | Gag-Pol polyprotein | 3.4.23.16 | 0.605 | |
| 3mws | 017 | Pol protein | / | 0.605 | |
| 1b6m | PI6 | Gag-Pol polyprotein | 3.4.23.16 | 0.604 | |
| 1pro | A88 | Gag-Pol polyprotein | / | 0.604 | |
| 2bpv | 1IN | Gag-Pol polyprotein | 3.4.23.16 | 0.604 | |
| 2bqv | A1A | Protease | / | 0.604 | |
| 2hs2 | 017 | Protease | / | 0.604 | |
| 2i4v | DJR | V-1 protease | / | 0.604 | |
| 2qd8 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.604 | |
| 2qnn | QN1 | Gag-Pol polyprotein | 3.4.23.16 | 0.604 | |
| 3d1z | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.604 | |
| 4a6c | QG9 | Gag-Pol polyprotein | 3.4.23.16 | 0.603 | |
| 4gb2 | 0LQ | Gag-Pol polyprotein | 2.7.7.49 | 0.603 | |
| 1hsg | MK1 | Gag-Pol polyprotein | / | 0.602 | |
| 2avv | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.602 | |
| 4nju | TPV | Protease | / | 0.602 | |
| 1d4k | PI8 | Gag-Pol polyprotein | 3.4.23.16 | 0.601 | |
| 1qbt | 146 | Gag-Pol polyprotein | 3.4.23.16 | 0.601 | |
| 2hb3 | GRL | Protease | / | 0.601 | |
| 2uy0 | HV1 | Gag-Pol polyprotein | 3.4.23.16 | 0.601 | |
| 7upj | INU | Gag-Pol polyprotein | 3.4.23.16 | 0.601 | |
| 1hxw | RIT | Gag-Pol polyprotein | / | 0.600 | |
| 2wl0 | 5AH | Gag-Pol polyprotein | / | 0.600 | |
| 3a2o | KNJ | Gag-Pol polyprotein | 3.4.23.16 | 0.600 | |
| 3aid | ARQ | Gag-Pol polyprotein | 3.4.23.16 | 0.600 | |
| 1sdv | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.599 | |
| 2f80 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.599 | |
| 2qi7 | MZ9 | Gag-Pol polyprotein | / | 0.599 | |
| 3oxv | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.599 | |
| 3vf7 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.599 | |
| 1ebw | BEI | Gag-Pol polyprotein | 3.4.23.16 | 0.598 | |
| 2bpw | 1IN | Gag-Pol polyprotein | 3.4.23.16 | 0.598 | |
| 2qd6 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.598 | |
| 2qi4 | MZ6 | Gag-Pol polyprotein | / | 0.598 | |
| 3ndx | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.598 | |
| 1iiq | 0ZR | Gag-Pol polyprotein | 3.4.23.16 | 0.597 | |
| 1odw | 0E8 | Gag-Pol polyprotein | 3.4.23.16 | 0.597 | |
| 1sbg | IM1 | Gag-Pol polyprotein | / | 0.597 | |
| 1zsr | 0ZT | Gag-Pol polyprotein | 3.4.23.16 | 0.597 | |
| 2bb9 | AKC | Gag-Pol polyprotein | 3.4.23.16 | 0.597 | |
| 1hwr | 216 | Gag-Pol polyprotein | 3.4.23.16 | 0.596 | |
| 1npv | L27 | Gag-Pol polyprotein | 3.4.23.16 | 0.596 | |
| 1qbu | 846 | Gag-Pol polyprotein | 3.4.23.16 | 0.596 | |
| 2bpx | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.596 | |
| 3mxe | K54 | Gag-Pol polyprotein | 3.4.23.16 | 0.596 | |
| 1c6x | 3IN | Protease | / | 0.595 | |
| 1d4i | BEG | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 1mui | AB1 | Protease | / | 0.595 | |
| 2r3w | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 2z4o | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 3bgb | LJG | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 3cyw | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.595 | |
| 3kfs | 3TL | Gag-Pol polyprotein | / | 0.595 | |
| 3s43 | 478 | Protease | / | 0.595 | |
| 1c6y | MK1 | Protease | / | 0.594 | |
| 1mtr | PI6 | Gag-Pol polyprotein | 3.4.23.16 | 0.594 | |
| 1w5x | BE5 | Gag-Pol polyprotein | 3.4.23.16 | 0.594 | |
| 2rkf | AB1 | Pol protein | / | 0.594 | |
| 2wkz | 5AH | Gag-Pol polyprotein | / | 0.594 | |
| 3jw2 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.594 | |
| 3kfr | 3TL | Gag-Pol polyprotein | / | 0.594 | |
| 1hvk | A79 | Gag-Pol polyprotein | / | 0.593 | |
| 2bbb | HH1 | Gag-Pol polyprotein | 3.4.23.16 | 0.593 | |
| 2uxz | HI1 | Gag-Pol polyprotein | 3.4.23.16 | 0.593 | |
| 3el5 | 1UN | Gag-Pol polyprotein | / | 0.593 | |
| 3oxx | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.593 | |
| 3oy4 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.593 | |
| 2qi3 | MZ5 | Gag-Pol polyprotein | / | 0.592 | |
| 3kfn | 3TL | Gag-Pol polyprotein | / | 0.592 | |
| 3qn8 | NI7 | Gag-Pol polyprotein | 3.4.23.16 | 0.592 | |
| 4dqh | 017 | Gag-Pol polyprotein | / | 0.592 | |
| 4hla | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.592 | |
| 1d4j | MSC | Gag-Pol polyprotein | 3.4.23.16 | 0.591 | |
| 1tcx | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.591 | |
| 3gga | GGW | Gag-Pol polyprotein | / | 0.591 | |
| 3oxw | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.591 | |
| 4dqc | 017 | Gag-Pol polyprotein | / | 0.591 | |
| 1a8g | 2Z4 | Gag-Pol polyprotein | 3.4.23.16 | 0.590 | |
| 2f8g | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.590 | |
| 2qnq | QN3 | Gag-Pol polyprotein | 3.4.23.16 | 0.590 | |
| 2r43 | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.590 | |
| 3dk1 | G05 | Gag-Pol polyprotein | 3.4.23.16 | 0.590 | |
| 3nu9 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.590 | |
| 3o9c | K20 | Pol polyprotein | / | 0.590 | |
| 3o9d | K19 | Pol polyprotein | / | 0.590 | |
| 3ok9 | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.590 | |
| 3sa9 | A68 | Protease | / | 0.590 | |
| 4dqb | 017 | Gag-Pol polyprotein | / | 0.590 | |
| 1b6p | PI7 | Gag-Pol polyprotein | 3.4.23.16 | 0.589 | |
| 1bdr | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.589 | |
| 1d4h | BEH | Gag-Pol polyprotein | 3.4.23.16 | 0.589 | |
| 1dif | A85 | Gag-Pol polyprotein | / | 0.589 | |
| 1g2k | NM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.589 | |
| 1g35 | AHF | Gag-Pol polyprotein | 3.4.23.16 | 0.589 | |
| 1meu | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.589 | |
| 3zps | EQM | Gag-Pol polyprotein | 3.4.23.16 | 0.589 | |
| 1bwa | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 1c70 | L75 | Protease | / | 0.588 | |
| 1idb | 0DO | Gag-Pol polyprotein | / | 0.588 | |
| 1mrw | K57 | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 1sdu | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 1siv | PSI | Gag-Pol polyprotein | / | 0.588 | |
| 1z1r | HBH | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 2b7z | MK1 | Gag-Pol polyprotein | / | 0.588 | |
| 2bpy | 3IN | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 3kdc | JZP | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 3sa7 | 55A | Protease | / | 0.588 | |
| 3zpt | M8Y | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 4q1w | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 4q1x | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 4ye3 | G04 | Gag-Pol polyprotein | 3.4.23.16 | 0.588 | |
| 1k2b | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.587 | |
| 2qi6 | MZ8 | Gag-Pol polyprotein | / | 0.587 | |
| 3djk | G55 | Gag-Pol polyprotein | 3.4.23.16 | 0.587 | |
| 3nuj | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.587 | |
| 1daz | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.586 | |
| 1hsh | MK1 | Gag-Pol polyprotein | / | 0.586 | |
| 1izh | Q50 | Protease | / | 0.586 | |
| 1w5y | BE6 | Gag-Pol polyprotein | 3.4.23.16 | 0.586 | |
| 2aqu | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.586 | |
| 2qhc | AB1 | Protease | / | 0.586 | |
| 3mxd | K53 | Gag-Pol polyprotein | 3.4.23.16 | 0.586 | |
| 4q1y | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.586 | |
| 2i4d | QFI | Protease | / | 0.585 | |
| 2i4u | DJR | Protease | / | 0.585 | |
| 3i2l | 2NC | Protease | / | 0.585 | |
| 3vfb | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.585 | |
| 4njv | RIT | Protease | / | 0.585 | |
| 4rvj | 478 | Protease | / | 0.585 | |
| 1hpv | 478 | Gag-Pol polyprotein | / | 0.584 | |
| 1hvj | A78 | Gag-Pol polyprotein | / | 0.584 | |
| 1qbr | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 1sdt | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 1t7k | BH0 | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 2pk6 | O33 | V-1 protease | / | 0.584 | |
| 3ecg | 065 | Gag-Pol polyprotein | 3.4.23.47 | 0.584 | |
| 3eky | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 3gi4 | K60 | Gag-Pol polyprotein | / | 0.584 | |
| 3nu4 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.584 | |
| 1b6k | PI5 | Gag-Pol polyprotein | 3.4.23.16 | 0.583 | |
| 2b60 | RIT | Pol polyprotein | / | 0.583 | |
| 3ekw | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.583 | |
| 3i7e | DJR | Gag-Pol polyprotein | / | 0.583 | |
| 3nu5 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.583 | |
| 3zpu | M8B | Gag-Pol polyprotein | 3.4.23.16 | 0.583 | |
| 9hvp | 0E9 | Gag-Pol polyprotein | / | 0.583 | |
| 1bwb | 146 | Gag-Pol polyprotein | 3.4.23.16 | 0.582 | |
| 2q54 | MU1 | Protease | / | 0.582 | |
| 2q55 | MU0 | Protease | / | 0.582 | |
| 2qak | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.582 | |
| 3i6o | GR6 | Gag-Pol polyprotein | 3.4.23.16 | 0.582 | |
| 3kf0 | 3TL | Gag-Pol polyprotein | / | 0.582 | |
| 3qbf | JHG | Gag-Pol polyprotein | 3.4.23.16 | 0.582 | |
| 3sac | AF8 | Protease | / | 0.582 | |
| 3tl9 | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.582 | |
| 3vf5 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.582 | |
| 4a4q | UX9 | Pol protein | / | 0.582 | |
| 4dqe | 017 | Gag-Pol polyprotein | / | 0.582 | |
| 1hvl | A76 | Gag-Pol polyprotein | / | 0.581 | |
| 2bpz | 3IN | Gag-Pol polyprotein | 3.4.23.16 | 0.581 | |
| 2f3k | RO1 | Protease | / | 0.581 | |
| 3d1x | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.581 | |
| 3qrm | NK7 | Gag-Pol polyprotein | 3.4.23.16 | 0.581 | |
| 3t3c | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.581 | |
| 1bv7 | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.580 | |
| 1d4l | PI9 | Gag-Pol polyprotein | 3.4.23.16 | 0.580 | |
| 1hvi | A77 | Protease | / | 0.580 | |
| 1mer | DMQ | Gag-Pol polyprotein | 3.4.23.16 | 0.580 | |
| 2i4x | KGQ | Protease | / | 0.580 | |
| 2psu | MUU | Protease | / | 0.580 | |
| 3el4 | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.580 | |
| 3ggx | GGX | Gag-Pol polyprotein | / | 0.580 | |
| 3o9e | A60 | Pol polyprotein | / | 0.580 | |
| 3o9g | F53 | Gag-Pol polyprotein | / | 0.580 | |
| 3sa8 | K83 | Protease | / | 0.580 | |
| 4djp | M73 | Pol polyprotein | / | 0.580 | |
| 4njs | G08 | Protease | / | 0.580 | |
| 1t7j | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 2cej | 1AH | Pol protein | / | 0.579 | |
| 2cem | 2AH | Pol protein | / | 0.579 | |
| 2pym | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 2qd7 | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 2qhy | MZ1 | Gag-Pol polyprotein | / | 0.579 | |
| 3jvw | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.579 | |
| 3o9a | K14 | Pol polyprotein | / | 0.579 | |
| 3s85 | LK0 | Gag-Pol polyprotein | / | 0.579 | |
| 1sgu | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.578 | |
| 2cen | 4AH | Protease | / | 0.578 | |
| 2qi5 | MZ7 | Gag-Pol polyprotein | / | 0.578 | |
| 3ndw | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.578 | |
| 3oxc | ROC | Protease | / | 0.578 | |
| 4hdp | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.578 | |
| 1bv9 | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 2r38 | G4G | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 2r5p | MK1 | Gag-Pol polyprotein | / | 0.577 | |
| 3el1 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 3sa5 | A69 | Protease | / | 0.577 | |
| 4dfg | 0JV | Gag-Pol polyprotein | 3.4.23.16 | 0.577 | |
| 1dw6 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 1fg6 | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 1msn | JE2 | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 2fde | 385 | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 2q64 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 3em4 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 3em6 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.576 | |
| 3o9h | K2E | Gag-Pol polyprotein | / | 0.576 | |
| 4djq | M86 | Pol polyprotein | / | 0.576 | |
| 1k1u | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.575 | |
| 1xl5 | 190 | Gag-Pol polyprotein | 3.4.23.16 | 0.575 | |
| 2hc0 | AB2 | Protease | / | 0.575 | |
| 2pqz | G0G | Gag-Pol polyprotein | 3.4.23.16 | 0.575 | |
| 2qi0 | MZ3 | Gag-Pol polyprotein | / | 0.575 | |
| 2qi1 | MZ4 | Gag-Pol polyprotein | / | 0.575 | |
| 3nls | 016 | Gag-Pol polyprotein | 3.4.23.16 | 0.575 | |
| 3qaa | G04 | Gag-Pol polyprotein | 3.4.23.16 | 0.575 | |
| 3sab | F78 | Protease | / | 0.575 | |
| 1a9m | U0E | Gag-Pol polyprotein | / | 0.574 | |
| 3qp0 | NI8 | Gag-Pol polyprotein | 3.4.23.16 | 0.574 | |
| 1msm | JE2 | Gag-Pol polyprotein | 3.4.23.16 | 0.573 | |
| 1z1h | HBB | Gag-Pol polyprotein | 3.4.23.16 | 0.573 | |
| 2i4w | KGQ | Protease | / | 0.573 | |
| 2pk5 | 075 | Protease | / | 0.573 | |
| 3gi6 | D78 | Gag-Pol polyprotein | / | 0.573 | |
| 3nu3 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.573 | |
| 3o9f | K2D | Gag-Pol polyprotein | / | 0.573 | |
| 3o9i | A61 | Gag-Pol polyprotein | / | 0.573 | |
| 4njt | 017 | Protease | / | 0.573 | |
| 4qgi | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.573 | |
| 1fg8 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.572 | |
| 1fgc | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.572 | |
| 2pwc | G3G | Gag-Pol polyprotein | 3.4.23.16 | 0.572 | |
| 2r5q | 1UN | Gag-Pol polyprotein | / | 0.572 | |
| 3ekv | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.572 | |
| 3lzs | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.572 | |
| 3sa3 | 23X | Protease | / | 0.572 | |
| 1ec1 | BEE | Gag-Pol polyprotein | 3.4.23.16 | 0.571 | |
| 1met | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.571 | |
| 2q5k | AB1 | Protease | / | 0.571 | |
| 2qci | 065 | Gag-Pol polyprotein | 3.4.23.16 | 0.571 | |
| 3lin | E13 | Protease | / | 0.571 | |
| 3nxe | 2NC | Protease | / | 0.571 | |
| 3ttp | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.571 | |
| 4dqf | 017 | Gag-Pol polyprotein | / | 0.571 | |
| 4heg | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.571 | |
| 1t7i | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.570 | |
| 1yt9 | OIS | Gag-Pol polyprotein | / | 0.570 | |
| 1zsf | 0ZS | Gag-Pol polyprotein | 3.4.23.16 | 0.570 | |
| 2fxe | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.570 | |
| 3ekx | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.570 | |
| 3el9 | DR7 | Gag-Pol polyprotein | 3.4.23.16 | 0.570 | |
| 3nu6 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.570 | |
| 1a94 | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.569 | |
| 1hih | C20 | Gag-Pol polyprotein | / | 0.569 | |
| 2aid | THK | Gag-Pol polyprotein | 3.4.23.16 | 0.569 | |
| 3o99 | K13 | Pol polyprotein | / | 0.569 | |
| 3r4b | 74T | Gag-Pol polyprotein | / | 0.569 | |
| 1c6z | ROC | Protease | / | 0.568 | |
| 1hii | C20 | Gag-Pol polyprotein | / | 0.568 | |
| 1izi | Q50 | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 1ohr | 1UN | V-1 PROTEASE protein | / | 0.568 | |
| 2avm | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 3cyx | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 3d20 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 3ndu | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 3pwr | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.568 | |
| 4djo | MK5 | Pol polyprotein | / | 0.568 | |
| 1hbv | GAN | Gag-Pol polyprotein | / | 0.567 | |
| 1kzk | JE2 | Gag-Pol polyprotein | 3.4.23.16 | 0.567 | |
| 1rl8 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.567 | |
| 2nmy | ROC | Protease | / | 0.567 | |
| 3nyg | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.566 | |
| 4hdb | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.566 | |
| 4hdf | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.566 | |
| 1hvs | A77 | Gag-Pol polyprotein | / | 0.565 | |
| 1k2c | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.565 | |
| 2pyn | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.565 | |
| 3liv | E16 | Protease | / | 0.565 | |
| 3ndt | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.565 | |
| 3nuo | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.565 | |
| 4j55 | 031 | Gag-Pol polyprotein | 3.4.23.16 | 0.565 | |
| 4j5j | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.565 | |
| 4kb9 | G79 | Protease | / | 0.565 | |
| 1fej | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.564 | |
| 1mrx | K57 | Gag-Pol polyprotein | 3.4.23.16 | 0.564 | |
| 1t3r | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.564 | |
| 2o4p | TPV | Protease | / | 0.564 | |
| 3ekp | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.564 | |
| 3sa6 | F71 | Protease | / | 0.564 | |
| 5upj | UIN | Gag-Pol polyprotein | / | 0.564 | |
| 2idw | 017 | Protease | / | 0.562 | |
| 4djr | 0KJ | Pol polyprotein | / | 0.562 | |
| 4k4p | 3TL | Gag-Pol polyprotein | / | 0.562 | |
| 1ffi | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.561 | |
| 2aoe | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.561 | |
| 2p3d | 3TL | Protease | / | 0.561 | |
| 2z54 | AB1 | Gag-Pol polyprotein | 3.4.23.16 | 0.561 | |
| 3bgc | LJH | Gag-Pol polyprotein | 3.4.23.16 | 0.561 | |
| 3ekq | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.561 | |
| 3lzv | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.561 | |
| 3sa4 | F72 | Protease | / | 0.561 | |
| 3st5 | G89 | Gag-Pol polyprotein | 3.4.23.16 | 0.561 | |
| 1dmp | DMQ | Gag-Pol polyprotein | 3.4.23.16 | 0.560 | |
| 2hs1 | 017 | Protease | / | 0.560 | |
| 3d1y | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.560 | |
| 3ggu | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.560 | |
| 3o9b | K2A | Pol polyprotein | / | 0.560 | |
| 3ucb | 017 | Gag-Pol polyprotein | / | 0.560 | |
| 3k4v | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.559 | |
| 1b6l | PI4 | Gag-Pol polyprotein | 3.4.23.16 | 0.558 | |
| 2p3b | 3TL | V-1 PROTEASE protein | / | 0.558 | |
| 2p3b | 3TL | V-1 protease | / | 0.558 | |
| 2psv | MUV | Protease | / | 0.558 | |
| 3ekt | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.558 | |
| 3ufn | ROC | Gag-Pol polyprotein | / | 0.558 | |
| 2r3t | G4G | Gag-Pol polyprotein | 3.4.23.16 | 0.557 | |
| 3dcr | KVS | Protease | / | 0.557 | |
| 1jld | 0PP | Gag-Pol polyprotein | / | 0.556 | |
| 2fxd | DR7 | Pol polyprotein | / | 0.556 | |
| 2ien | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.556 | |
| 1hos | PHP | Gag-Pol polyprotein | / | 0.555 | |
| 2nnk | ROC | Protease | / | 0.555 | |
| 2q63 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.555 | |
| 3fx5 | KNI | Gag-Pol polyprotein | 3.4.23.16 | 0.555 | |
| 2nnp | ROC | Protease | / | 0.554 | |
| 3s56 | ROC | Protease | / | 0.553 | |
| 1a8k | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.552 | |
| 1hpx | KNI | Gag-Pol polyprotein | / | 0.552 | |
| 3ckt | YDP | Gag-Pol polyprotein | 3.4.23.16 | 0.552 | |
| 2i0d | MUT | Protease | / | 0.551 | |
| 3qro | NK9 | Gag-Pol polyprotein | 3.4.23.16 | 0.551 | |
| 3qrs | NK8 | Gag-Pol polyprotein | 3.4.23.16 | 0.551 | |
| 1hiv | 1ZK | Gag-Pol polyprotein | / | 0.550 | |
| 3tog | 079 | Gag-Pol polyprotein | 2.7.7.49 | 0.550 | |
| 1bai | 0Q4 | Gag-Pro polyprotein | / | 0.549 | |
| 1m0b | 0ZQ | Gag-Pol polyprotein | 3.4.23.16 | 0.549 | |
| 2a1e | IPF | Gag-Pol polyprotein | 3.4.23.16 | 0.549 | |
| 2fle | AI | Protease | / | 0.549 | |
| 3saa | 77F | Protease | / | 0.549 | |
| 1vij | BAY | Gag-Pol polyprotein | / | 0.548 | |
| 3uhl | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.548 | |
| 1ff0 | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.547 | |
| 3lzu | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.547 | |
| 1sh9 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.546 | |
| 3em3 | 478 | Gag-Pol polyprotein | 3.4.23.16 | 0.546 | |
| 3liq | E14 | Protease | / | 0.546 | |
| 4i8z | G08 | Gag-Pol polyprotein | 3.4.23.16 | 0.546 | |
| 2pwr | G4G | Gag-Pol polyprotein | 3.4.23.16 | 0.545 | |
| 2q3k | MUW | Gag-Pol polyprotein | / | 0.545 | |
| 2f81 | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.544 | |
| 3hzc | 2NC | Protease | / | 0.542 | |
| 3jvy | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.542 | |
| 1hxb | ROC | Gag-Pol polyprotein | 3.4.23.16 | 0.541 | |
| 3pwm | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.541 | |
| 1ivq | 0PX | Gag-Pol polyprotein | / | 0.540 | |
| 1k6v | XN2 | Gag-Pol polyprotein | 3.4.23.16 | 0.540 | |
| 1ody | LP1 | Gag-Pol polyprotein | 3.4.23.16 | 0.540 | |
| 3bxr | DRR | Gag-Pol polyprotein | 3.4.23.16 | 0.540 | |
| 3lix | E17 | Protease | / | 0.540 | |
| 1ivp | 1ZK | Gag-Pol polyprotein | / | 0.539 | |
| 3gi5 | K62 | Gag-Pol polyprotein | / | 0.539 | |
| 1fff | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.538 | |
| 3qih | NI7 | Gag-Pol polyprotein | 3.4.23.16 | 0.537 | |
| 3so9 | 017 | Pol protein | / | 0.537 | |
| 3sm2 | 478 | Putative gag-pro-pol polyprotein | / | 0.535 | |
| 3bvb | 017 | Gag-Pol polyprotein | 3.4.23.16 | 0.532 | |
| 2p3c | 3TL | Protease | / | 0.531 | |
| 3tof | 076 | Gag-Pol polyprotein | 2.7.7.49 | 0.531 | |
| 2i0a | MUI | Protease | / | 0.529 | |
| 3nwq | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.529 | |
| 2p3a | 3TL | Pol protein | / | 0.528 | |
| 3lit | E15 | Protease | / | 0.528 | |
| 3ogq | AB1 | Pol polyprotein | / | 0.528 | |
| 3toh | 079 | Gag-Pol polyprotein | 2.7.7.49 | 0.528 | |
| 1vik | BAY | Gag-Pol polyprotein | / | 0.527 | |
| 1bvg | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.526 | |
| 1hvh | Q82 | Gag-Pol polyprotein | 3.4.23.16 | 0.526 | |
| 3bva | 2NC | Gag-Pol polyprotein | 3.4.23.16 | 0.526 | |
| 3qpj | N4I | Gag-Pol polyprotein | 3.4.23.16 | 0.525 | |
| 4j54 | G52 | Gag-Pol polyprotein | 3.4.23.16 | 0.524 | |
| 1k6p | XN3 | Gag-Pol polyprotein | 3.4.23.16 | 0.523 | |
| 3el0 | 1UN | Gag-Pol polyprotein | 3.4.23.16 | 0.523 | |
| 1ebk | 0Q4 | Gag-Pol polyprotein | 3.4.23.16 | 0.522 | |
| 3slz | 3TL | Putative gag-pro-pol polyprotein | / | 0.522 | |
| 1k6t | XN1 | Gag-Pol polyprotein | 3.4.23.16 | 0.519 | |
| 3dck | KVI | Protease | / | 0.519 | |
| 1bve | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.517 | |
| 3nwx | KVS | Gag-Pol polyprotein | 3.4.23.16 | 0.508 | |
| 1xl2 | 189 | Gag-Pol polyprotein | 3.4.23.16 | 0.502 | |
| 1n49 | RIT | Gag-Pol polyprotein | 3.4.23.16 | 0.500 | |
| 1k6c | MK1 | Gag-Pol polyprotein | 3.4.23.16 | 0.496 | |
| 3wsj | MK1 | Protease | / | 0.492 | |
| 3bxs | DRS | Gag-Pol polyprotein | 3.4.23.16 | 0.490 | |
| 3bhe | BZN | Gag-Pol polyprotein | 3.4.23.16 | 0.472 | |
| 4kzo | NAP | Isocitrate dehydrogenase [NADP] cytoplasmic | 1.1.1.42 | 0.470 | |
| 2yir | YIR | Serine/threonine-protein kinase Chk2 | 2.7.11.1 | 0.460 | |
| 3ic9 | FAD | Putative dihydrolipoamide dehydrogenase | / | 0.458 | |
| 4wq5 | ATP | tRNA N6-adenosine threonylcarbamoyltransferase | / | 0.454 | |
| 1w2x | RCP | Acetyl-CoA carboxylase | / | 0.450 | |
| 3slk | NDP | Polyketide synthase extender module 2 | / | 0.450 | |
| 3lad | FAD | Dihydrolipoyl dehydrogenase | / | 0.448 | |
| 1hyg | NAP | L-2-hydroxycarboxylate dehydrogenase (NAD(P)(+)) | / | 0.447 | |
| 2g5c | NAD | Prephenate dehydrogenase | / | 0.446 | |
| 3nx4 | NAP | Putative oxidoreductase | / | 0.446 | |
| 2a8x | FAD | Dihydrolipoyl dehydrogenase | 1.8.1.4 | 0.445 | |
| 1tcw | IM1 | Gag-Pol polyprotein | / | 0.444 | |
| 3cid | 318 | Beta-secretase 1 | 3.4.23.46 | 0.443 | |
| 1bdl | IM1 | Gag-Pol polyprotein | 3.4.23.16 | 0.442 | |
| 2jd0 | NDP | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | / | 0.442 | |
| 3own | 3OW | Renin | 3.4.23.15 | 0.442 | |
| 4fk1 | FAD | Putative thioredoxin reductase | / | 0.442 | |
| 3ajr | NAD | NDP-sugar epimerase | / | 0.441 | |
| 3vt8 | YI3 | Vitamin D3 receptor | / | 0.441 | |
| 3vyf | VYF | Renin | 3.4.23.15 | 0.441 | |
| 1t0l | NAP | Isocitrate dehydrogenase [NADP] cytoplasmic | 1.1.1.42 | 0.440 |