Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3t2g13PFructose-1,6-bisphosphate aldolase/phosphatase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3t2g13PFructose-1,6-bisphosphate aldolase/phosphatase/1.000
1ijjLARActin, alpha skeletal muscle/0.505
3rmwUPGGlycogenin-12.4.1.1860.479
2woeAR6ADP-ribosyl-[dinitrogen reductase] glycohydrolase3.2.2.240.468
2wzgUPGUncharacterized protein/0.464
1r35I58Nitric oxide synthase, inducible1.14.13.390.457
1rdwLARActin, alpha skeletal muscle/0.456
3ua808WGlutamate receptor 2/0.454
3e7iB2Nitric oxide synthase, inducible1.14.13.390.453
4ug5XFKNitric oxide synthase oxygenase1.14.13.1650.453
3tm0ANPAminoglycoside 3'-phosphotransferase2.7.1.950.450
5cypGSPSeptin-9/0.450
1wkhPPE[LysW]-aminoadipate semialdehyde transaminase/0.448
3ivgFG5Pantothenate synthetase6.3.2.10.447
3kp0Z98D-ornithine 4,5-aminomutase subunit beta/0.447
5ero210Fusicoccadiene synthase2.5.1.290.447
2xszATPRuvB-like 23.6.4.120.445
3qfrFMNNADPH--cytochrome P450 reductase/0.444
4ddhMS0Pantothenate synthetase6.3.2.10.444
4avgSL6Polymerase acidic protein/0.443
4ug91EWNitric oxide synthase oxygenase1.14.13.1650.443
5aqzSGVHeat shock 70 kDa protein 1A/0.443
3isjA8DPantothenate synthetase6.3.2.10.442
3q9lATPSeptum site-determining protein MinD/0.441
4b1uLABActin, alpha skeletal muscle/0.440