1.650 Å
X-ray
2015-09-22
| Name: | Heat shock 70 kDa protein 1A |
|---|---|
| ID: | HS71A_HUMAN |
| AC: | P0DMV8 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 31.230 |
|---|---|
| Number of residues: | 29 |
| Including | |
| Standard Amino Acids: | 26 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 3 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.053 | 1326.375 |
| % Hydrophobic | % Polar |
|---|---|
| 39.95 | 60.05 |
| According to VolSite | |

| HET Code: | SGV |
|---|---|
| Formula: | C12H15N5O5 |
| Molecular weight: | 309.278 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 59.54 % |
| Polar Surface area: | 169.73 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 8 |
| H-Bond Donors: | 5 |
| Rings: | 3 |
| Aromatic rings: | 2 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 3 |
| X | Y | Z |
|---|---|---|
| 15.3253 | -10.6223 | -10.0006 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| O2' | OE2 | GLU- 268 | 2.69 | 169.63 | H-Bond (Ligand Donor) |
| O2' | NZ | LYS- 271 | 2.78 | 150.65 | H-Bond (Protein Donor) |
| O3' | NZ | LYS- 271 | 3.41 | 130.02 | H-Bond (Protein Donor) |
| C5 | CG | ARG- 272 | 3.71 | 0 | Hydrophobic |
| N1 | OG | SER- 275 | 2.67 | 173.34 | H-Bond (Protein Donor) |
| C5 | CD | ARG- 342 | 4.09 | 0 | Hydrophobic |
| N3 | O | HOH- 2334 | 3.06 | 179.95 | H-Bond (Protein Donor) |