1.650 Å
X-ray
2015-09-22
Name: | Heat shock 70 kDa protein 1A |
---|---|
ID: | HS71A_HUMAN |
AC: | P0DMV8 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 31.230 |
---|---|
Number of residues: | 29 |
Including | |
Standard Amino Acids: | 26 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 3 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.053 | 1326.375 |
% Hydrophobic | % Polar |
---|---|
39.95 | 60.05 |
According to VolSite |
HET Code: | SGV |
---|---|
Formula: | C12H15N5O5 |
Molecular weight: | 309.278 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 59.54 % |
Polar Surface area: | 169.73 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 8 |
H-Bond Donors: | 5 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 3 |
X | Y | Z |
---|---|---|
15.3253 | -10.6223 | -10.0006 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
O2' | OE2 | GLU- 268 | 2.69 | 169.63 | H-Bond (Ligand Donor) |
O2' | NZ | LYS- 271 | 2.78 | 150.65 | H-Bond (Protein Donor) |
O3' | NZ | LYS- 271 | 3.41 | 130.02 | H-Bond (Protein Donor) |
C5 | CG | ARG- 272 | 3.71 | 0 | Hydrophobic |
N1 | OG | SER- 275 | 2.67 | 173.34 | H-Bond (Protein Donor) |
C5 | CD | ARG- 342 | 4.09 | 0 | Hydrophobic |
N3 | O | HOH- 2334 | 3.06 | 179.95 | H-Bond (Protein Donor) |