3.000 Å
X-ray
2011-07-22
| Name: | Fructose-1,6-bisphosphate aldolase/phosphatase |
|---|---|
| ID: | B1YAL1_PYRNV |
| AC: | B1YAL1 |
| Organism: | Pyrobaculum neutrophilum |
| Reign: | Archaea |
| TaxID: | 444157 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 37.678 |
|---|---|
| Number of residues: | 24 |
| Including | |
| Standard Amino Acids: | 21 |
| Non Standard Amino Acids: | 3 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | MG MG |
| Ligandability | Volume (Å3) |
|---|---|
| 0.498 | 789.750 |
| % Hydrophobic | % Polar |
|---|---|
| 38.03 | 61.97 |
| According to VolSite | |

| HET Code: | 13P |
|---|---|
| Formula: | C3H5O6P |
| Molecular weight: | 168.042 g/mol |
| DrugBank ID: | DB04326 |
| Buried Surface Area: | 71.39 % |
| Polar Surface area: | 119.53 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 6 |
| H-Bond Donors: | 1 |
| Rings: | 0 |
| Aromatic rings: | 0 |
| Anionic atoms: | 2 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 4 |
| X | Y | Z |
|---|---|---|
| -62.0477 | 28.7874 | 17.7256 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C3 | CB | HIS- 18 | 4.21 | 0 | Hydrophobic |
| O2P | NZ | LYS- 133 | 2.85 | 130.88 | H-Bond (Protein Donor) |
| O2P | NZ | LYS- 133 | 2.85 | 0 | Ionic (Protein Cationic) |
| O3 | N | ARG- 266 | 2.74 | 166 | H-Bond (Protein Donor) |
| O3 | OD2 | ASP- 297 | 2.93 | 162.31 | H-Bond (Ligand Donor) |
| O2P | MG | MG- 408 | 2.03 | 0 | Metal Acceptor |
| O3P | MG | MG- 409 | 2.41 | 0 | Metal Acceptor |