scPDB - 4ug9 entry

Protein Data Bank Entry:

PDB ID : 4ug9

Resolution :1.840 Å

Experimental Method : X-ray

Deposition Date : 2015-03-22

Activity from ChEMBL: What is pChEMBL ?

	Min	Mean	Median	Standard Deviation	Max	Count
pChEMBL:

List of CHEMBLId :

Binding Site :

Uniprot Annotation

Name:	Nitric oxide synthase oxygenase
ID:	NOSO_BACSU
AC:	O34453
Organism:	Bacillus subtilis
Reign:	Bacteria
TaxID:	224308
EC Number:	1.14.13.165

Chains:

Chain Name:	Percentage of Residues within binding site
A	100 %

Ligand binding site composition:

B-Factor:	10.293
Number of residues:	27
Including
Standard Amino Acids:	24
Non Standard Amino Acids:	2
Water Molecules:	1
Cofactors:
Metals:	CL

Cavity properties

Ligandability	Volume (Å3)
1.220	1198.125

% Hydrophobic	% Polar
49.58	50.42
According to VolSite

Ligand :

HET Code:	1EW
Formula:	C25H34N5
Molecular weight:	404.571 g/mol
DrugBank ID:	-
Buried Surface Area:	54.22 %
Polar Surface area:	105.46 Å2

Number of
H-Bond Acceptors:	4
H-Bond Donors:	3
Rings:	3
Aromatic rings:	3
Anionic atoms:	0
Cationic atoms:	1
Rule of Five Violation:	0
Rotatable Bonds:	9

Mass center Coordinates

X	Y	Z
6.55527	12.9983	23.4317

Binding mode :

What is Poseview ?

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Image generated by PoseView

Protein

Binding Site

Ligand

Interaction pattern

hydrophobic (CA)

aromatic (CZ)

hydrogen bond acceptor (O)

hydrogen bond acceptor/donor (OG)

hydrogen bond donor (N)

positively ionized (NZ)

negatively ionized (OD1)

metal (ZN)

Legend:

Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand

Image generated using PoseView by BioSolveIT

Ligand	Protein		Interaction
Atom	Atom	Residue	Distance (Å)	Angle (°)	Type
C03	CG	PRO- 216	4.03	0	Hydrophobic	false
C09	CD1	ILE- 218	3.72	0	Hydrophobic	false
C05	CG1	ILE- 218	3.74	0	Hydrophobic	false
C07	CD1	PHE- 235	3.65	0	Hydrophobic	false
N02	O	TRP- 238	2.89	158.08	H-Bond (Ligand Donor)	false
N01	OE1	GLU- 243	2.71	165.54	H-Bond (Ligand Donor)	false
N01	OE2	GLU- 243	3.35	129.32	H-Bond (Ligand Donor)	false
N02	OE2	GLU- 243	2.63	172.45	H-Bond (Ligand Donor)	false
C29	CH2	TRP- 329	3.3	0	Hydrophobic	false