Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3ken | ZZD | Kinesin-like protein KIF11 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
3ken | ZZD | Kinesin-like protein KIF11 | / | 1.104 | |
2wog | ZZD | Kinesin-like protein KIF11 | / | 0.990 | |
4bbg | V02 | Kinesin-like protein KIF11 | / | 0.959 | |
2x2r | X2O | Kinesin-like protein KIF11 | / | 0.953 | |
2xae | 2XA | Kinesin-like protein KIF11 | / | 0.921 | |
4a51 | DQ8 | Kinesin-like protein KIF11 | / | 0.818 | |
1drt | PCV | Clavaminate synthase 1 | 1.14.11.21 | 0.744 | |
1aq1 | STU | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.669 | |
1err | RAL | Estrogen receptor | / | 0.667 | |
3elu | SAM | Methyltransferase | / | 0.666 | |
1nmd | ATP | Major actin | / | 0.660 | |
1wet | GUN | HTH-type transcriptional repressor PurR | / | 0.660 | |
1xxj | UNC | Uricase | 1.7.3.3 | 0.660 | |
2cgw | 3C3 | Serine/threonine-protein kinase Chk1 | 2.7.11.1 | 0.660 | |
2fzk | CTP | Aspartate carbamoyltransferase regulatory chain | / | 0.660 | |
2jey | HLO | Acetylcholinesterase | 3.1.1.7 | 0.660 | |
2oap | ANP | Type II secretion system protein (GspE-2) | / | 0.660 | |
2z7q | ACP | Ribosomal protein S6 kinase alpha-1 | 2.7.11.1 | 0.660 | |
2zs9 | ADP | Pantothenate kinase | 2.7.1.33 | 0.660 | |
3cwq | ADP | ParA family chromosome partitioning protein | / | 0.660 | |
3f8p | NAD | NADH oxidase/thioredoxin reductase | / | 0.660 | |
3f8r | NAP | NADH oxidase/thioredoxin reductase | / | 0.660 | |
3fwy | ADP | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein | / | 0.660 | |
3u9d | ATP | Actin, alpha skeletal muscle | / | 0.660 | |
3zzn | ADP | L-lactate dehydrogenase | / | 0.660 | |
5bnt | NAP | Aspartate-semialdehyde dehydrogenase | 1.2.1.11 | 0.660 | |
3qud | N3F | Mitogen-activated protein kinase 14 | / | 0.658 | |
4nxx | GDP | Mitochondrial dynamics protein MID51 | / | 0.658 | |
4o3m | ADP | Bloom syndrome protein | 3.6.4.12 | 0.658 | |
3l9h | EMQ | Kinesin-like protein KIF11 | / | 0.656 | |
4cdg | ADP | Bloom syndrome protein | 3.6.4.12 | 0.656 | |
1h48 | C5P | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | 4.6.1.12 | 0.655 | |
3kjg | ADP | CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC | / | 0.653 | |
2x7d | EGB | Kinesin-like protein KIF11 | / | 0.651 | |
4nxv | GDP | Mitochondrial dynamics protein MID51 | / | 0.650 |