Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3c96 | FAD | Flavin-containing monooxygenase |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
3c96 | FAD | Flavin-containing monooxygenase | / | 1.212 | |
2rgj | FAD | Flavin-containing monooxygenase | / | 1.073 | |
4em3 | FAD | Coenzyme A disulfide reductase | / | 0.759 | |
1e1m | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.753 | |
1e6e | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.750 | |
1e1k | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.749 | |
1cjc | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.748 | |
5cku | FAD | L-ornithine N(5)-monooxygenase | / | 0.739 | |
4b69 | FAD | L-ornithine N(5)-monooxygenase | / | 0.728 | |
1k0l | FAD | p-hydroxybenzoate hydroxylase | / | 0.719 | |
1gte | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.717 | |
2c7g | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.716 | |
4d7e | FAD | Putative lysine-N-oxygenase | / | 0.712 | |
4k2x | FAD | Polyketide oxygenase/hydroxylase | / | 0.712 | |
1e1l | FAD | NADPH:adrenodoxin oxidoreductase, mitochondrial | 1.18.1.6 | 0.711 | |
4eqs | FAD | Coenzyme A disulfide reductase | / | 0.710 | |
1nhr | FAD | NADH peroxidase | 1.11.1.1 | 0.703 | |
1nhq | FAD | NADH peroxidase | 1.11.1.1 | 0.700 | |
1h7w | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.696 | |
1gth | FAD | Dihydropyrimidine dehydrogenase [NADP(+)] | 1.3.1.2 | 0.694 | |
1nhs | FAD | NADH peroxidase | 1.11.1.1 | 0.686 | |
3l8k | ADP | Dihydrolipoamide dehydrogenase (PdhD-3) | / | 0.683 | |
4eqx | FAD | Coenzyme A disulfide reductase | / | 0.682 | |
1cbo | FAD | Cholesterol oxidase | 1.1.3.6 | 0.681 | |
1nhp | FAD | NADH peroxidase | 1.11.1.1 | 0.681 | |
1npx | FAD | NADH peroxidase | 1.11.1.1 | 0.681 | |
3oc4 | FAD | Oxidoreductase, pyridine nucleotide-disulfide family | / | 0.681 | |
3s5w | FAD | L-ornithine N(5)-monooxygenase | / | 0.677 | |
2c31 | ADP | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.676 | |
3b6d | FAE | Cholesterol oxidase | 1.1.3.6 | 0.675 | |
4em4 | FAD | Coenzyme A disulfide reductase | / | 0.674 | |
4emw | FAD | Coenzyme A disulfide reductase | / | 0.674 | |
2gv8 | FAD | Thiol-specific monooxygenase | 1.14.13 | 0.672 | |
3cge | FAD | Coenzyme A disulfide reductase | / | 0.671 | |
4b1b | FAD | Thioredoxin reductase | 1.8.1.9 | 0.671 | |
1b8s | FAD | Cholesterol oxidase | 1.1.3.6 | 0.670 | |
3k30 | ADP | Histamine dehydrogenase | / | 0.669 | |
4z24 | FAD | Putative GMC-type oxidoreductase R135 | 1 | 0.668 | |
1jeh | FAD | Dihydrolipoyl dehydrogenase, mitochondrial | 1.8.1.4 | 0.666 | |
3sm8 | FNK | FAD-dependent catabolic D-arginine dehydrogenase DauA | / | 0.666 | |
4hb9 | FAD | Uncharacterized protein | / | 0.666 | |
2yqu | FAD | Dihydrolipoyl dehydrogenase | / | 0.665 | |
4u2t | FAD | Cholesterol oxidase | 1.1.3.6 | 0.664 | |
2yg6 | FAD | Putrescine oxidase | / | 0.663 | |
3bg7 | FAD | Pyranose 2-oxidase | / | 0.663 | |
4yac | NAI | C alpha-dehydrogenase | / | 0.663 | |
3sz0 | FAD | Sulfide-quinone reductase | / | 0.661 | |
3ka7 | FAD | Putative oxidoreductase | / | 0.660 | |
1lqu | FAD | NADPH-ferredoxin reductase FprA | 1.18.1.2 | 0.658 | |
2gew | FAD | Cholesterol oxidase | 1.1.3.6 | 0.658 | |
3gyi | FAD | Cholesterol oxidase | 1.1.3.6 | 0.658 | |
4nzh | FAD | L-ornithine N(5)-monooxygenase | / | 0.658 | |
3bgi | SAH | Thiopurine S-methyltransferase | 2.1.1.67 | 0.657 | |
4iv8 | SAM | Phosphoethanolamine N-methyltransferase,putative | / | 0.657 | |
1b4v | FAD | Cholesterol oxidase | 1.1.3.6 | 0.656 | |
2c3c | FAD | 2-oxopropyl-CoM reductase, carboxylating | 1.8.1.5 | 0.655 | |
3vqr | FAD | Putative oxidoreductase | / | 0.655 | |
4xwr | FAD | Cholesterol oxidase | 1.1.3.6 | 0.655 | |
1cc2 | FAD | Cholesterol oxidase | 1.1.3.6 | 0.653 | |
1h2h | NAD | L-aspartate dehydrogenase | 1.4.1.21 | 0.653 | |
3cnj | FAD | Cholesterol oxidase | 1.1.3.6 | 0.653 | |
3kpk | FAD | Sulfide-quinone reductase | / | 0.653 | |
4guv | FAD | TetX family tetracycline inactivation enzyme | / | 0.653 | |
4qi7 | FAD | Cellobiose dehydrogenase | / | 0.652 | |
3grs | FAD | Glutathione reductase, mitochondrial | 1.8.1.7 | 0.650 | |
3nug | NAD | Pyridoxal 4-dehydrogenase | 1.1.1.107 | 0.650 | |
4rek | FAD | Cholesterol oxidase | 1.1.3.6 | 0.650 |