Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2p7z OHT Estrogen-related receptor gamma

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2p7z OHTEstrogen-related receptor gamma / 1.176
1s9q OHTEstrogen-related receptor gamma / 0.896
2ewp TXFEstrogen-related receptor gamma / 0.892
2gpv OHTEstrogen-related receptor gamma / 0.807
4e5l DBHPolymerase acidic protein / 0.763
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
2bj4 OHTEstrogen receptor / 0.720
2jf9 OHTEstrogen receptor / 0.700
3ert OHTEstrogen receptor / 0.699
1qkn RALEstrogen receptor beta / 0.697
1s9p DESEstrogen-related receptor gamma / 0.686
2gpu OHTEstrogen-related receptor gamma / 0.679
4pp6 STLEstrogen receptor / 0.666
2d09 FLVBiflaviolin synthase CYP158A2 / 0.664
1uom PTIEstrogen receptor / 0.661
4e5f 0N7Polymerase acidic protein / 0.660
1l2j ETCEstrogen receptor beta / 0.658
2fsz OHTEstrogen receptor beta / 0.655