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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2j8t NAP Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2j8t NAPAldose reductase 1.1.1.21 1.599
2pev NDPAldose reductase 1.1.1.21 1.574
1z8a NAPAldose reductase 1.1.1.21 1.573
2pf8 NDPAldose reductase 1.1.1.21 1.570
1x98 NAPAldose reductase 1.1.1.21 1.556
3q67 NAPAldose reductase 1.1.1.21 1.555
1x96 NAPAldose reductase 1.1.1.21 1.528
2acq NAPAldose reductase 1.1.1.21 1.506
2iq0 NAPAldose reductase 1.1.1.21 1.496
1ads NAPAldose reductase 1.1.1.21 1.487
3v36 NAPAldose reductase 1.1.1.21 1.469
2acu NAPAldose reductase 1.1.1.21 1.440
2acs NAPAldose reductase 1.1.1.21 1.416
1ah4 NAPAldose reductase 1.1.1.21 1.388
3h7u NAPNADPH-dependent aldo-keto reductase, chloroplastic / 1.372
3q65 NAPAldose reductase 1.1.1.21 1.356
2bgs NDPAldose reductase 1.1.1.21 1.325
2pfh NDPAldose reductase 1.1.1.21 1.312
3qkz NAPAldose reductase-related protein 1 1.1.1.21 1.274
1ef3 NAPAldose reductase 1.1.1.21 1.254
4pmj NAPPutative oxidoreductase / 1.237
3bv7 NAP3-oxo-5-beta-steroid 4-dehydrogenase / 1.220
5c7h NDPPutative oxidoreductase / 1.216
4g5d NDPProstaglandin F synthase 1.1.1.188 1.206
4xzn NAPAldo-keto reductase family 1 member B10 1.1.1 1.174
2vdg NDPAldose reductase 1.1.1.21 1.132
3uzw NAP3-oxo-5-beta-steroid 4-dehydrogenase / 1.113
3h7r NAPAldo-keto reductase family 4 member C8 / 1.105
1az2 NAPAldose reductase 1.1.1.21 1.101
3o3r NAPAldose reductase-related protein 1 1.1.1.21 1.094
4ijr NDPD-arabinose dehydrogenase [NAD(P)+] heavy chain 1.1.1.117 1.091
4jtq NAPAldo-keto reductase family 1 member C2 / 1.067
1hqt NAPAlcohol dehydrogenase [NADP(+)] 1.1.1.2 1.056
4xzm NAPAldo-keto reductase family 1 member B10 1.1.1 1.044
3g1r NAP3-oxo-5-beta-steroid 4-dehydrogenase / 1.040
1k8c NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 1.032
1q5m NDPProstaglandin-E(2) 9-reductase 1.1.1.189 1.029
3wcz NAPAldo-keto reductase AKR2E4 / 0.983
1vp5 NAPOxidoreductase, aldo/keto reductase family / 0.977
4dz5 NAPAldo-keto reductase family 1 member C3 / 0.973
3wbw NDPPutative 2,5-diketo-D-gluconic acid reductase / 0.971
1r38 NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.969
1mi3 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.954
3dop NAP3-oxo-5-beta-steroid 4-dehydrogenase / 0.948
3buv NAP3-oxo-5-beta-steroid 4-dehydrogenase / 0.946
1s1p NAPAldo-keto reductase family 1 member C3 / 0.944
1s1r NAPAldo-keto reductase family 1 member C3 / 0.941
1a80 NDP2,5-diketo-D-gluconic acid reductase A 1.1.1.346 0.937
2fvl NAPAldo-keto reductase family 1 member C4 1.1.1.225 0.925
4xo7 NAPAldo-keto reductase family 1 member C2 / 0.922
1c9w NAPAldose reductase-related protein 2 / 0.920
4l1x NAPAldo-keto reductase family 1 member C2 / 0.904
1zgd NAPChalcone reductase / 0.900
3caq NDP3-oxo-5-beta-steroid 4-dehydrogenase / 0.869
2hdj NDPAldo-keto reductase family 1 member C2 / 0.864
1m9h NAD2,5-diketo-D-gluconic acid reductase A 1.1.1.346 0.858
1ye4 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.844
4jq3 NAPAldo-keto reductase family 1 member C2 / 0.835
1sm9 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.822
1ye6 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.786
3ln3 NADAldo-keto reductase family 1 member C13 / 0.783
1z9a NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.766
2hej NDPAldo-keto reductase family 1 member C21 1.1.1 0.745
1lwi NAP3-alpha-hydroxysteroid dehydrogenase 1.1.1.50 0.727
1ye6 NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.719
3wg6 NDPNADPH-dependent conjugated polyketone reductase C1 / 0.719
2bp1 NDPAflatoxin B1 aldehyde reductase member 2 / 0.713
1og6 NAPOxidoreductase YdhF 1 0.707
2he5 NDPAldo-keto reductase family 1 member C21 1.1.1 0.707
2clp NDPAflatoxin B1 aldehyde reductase member 3 / 0.706
4h8n NDPNADPH-dependent conjugated polyketone reductase C2 / 0.688
1qrq NDPVoltage-gated potassium channel subunit beta-2 / 0.684
1gve NAPAflatoxin B1 aldehyde reductase member 3 1 0.661
4gyy 12VUDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit / 0.660