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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2c91 NAP Aflatoxin B1 aldehyde reductase member 2

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2c91 NAPAflatoxin B1 aldehyde reductase member 2 / 1.331
2bp1 NDPAflatoxin B1 aldehyde reductase member 2 / 1.220
1gve NAPAflatoxin B1 aldehyde reductase member 3 1 1.072
2clp NDPAflatoxin B1 aldehyde reductase member 3 / 0.960
1lqa NDPProtein tas / 0.856
4jta NAPVoltage-gated potassium channel subunit beta-2 / 0.825
2r9r NAPVoltage-gated potassium channel subunit beta-2 / 0.794
3lnm NAPVoltage-gated potassium channel subunit beta-2 / 0.791
4jq3 NAPAldo-keto reductase family 1 member C2 / 0.749
3lut NAPVoltage-gated potassium channel subunit beta-2 / 0.735
1qrq NDPVoltage-gated potassium channel subunit beta-2 / 0.711
4xzm NAPAldo-keto reductase family 1 member B10 1.1.1 0.707
3wcz NAPAldo-keto reductase AKR2E4 / 0.705
2he5 NDPAldo-keto reductase family 1 member C21 1.1.1 0.699
1s1p NAPAldo-keto reductase family 1 member C3 / 0.697
4jtd NAPVoltage-gated potassium channel subunit beta-2 / 0.696
1mi3 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.694
1s1r NAPAldo-keto reductase family 1 member C3 / 0.693
3v36 NAPAldose reductase 1.1.1.21 0.687
2hdj NDPAldo-keto reductase family 1 member C2 / 0.686
3g1r NAP3-oxo-5-beta-steroid 4-dehydrogenase / 0.685
4xo7 NAPAldo-keto reductase family 1 member C2 / 0.685
1m9h NAD2,5-diketo-D-gluconic acid reductase A 1.1.1.346 0.682
1r38 NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.681
4aub NAPL-glyceraldehyde 3-phosphate reductase 1.1.1 0.679
4ijr NDPD-arabinose dehydrogenase [NAD(P)+] heavy chain 1.1.1.117 0.673
2acu NAPAldose reductase 1.1.1.21 0.672
4g5d NDPProstaglandin F synthase 1.1.1.188 0.671
3caq NDP3-oxo-5-beta-steroid 4-dehydrogenase / 0.670
2fvl NAPAldo-keto reductase family 1 member C4 1.1.1.225 0.669
1k8c NAPNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.665
2bgs NDPAldose reductase 1.1.1.21 0.664
1ef3 NAPAldose reductase 1.1.1.21 0.659
1pz1 NAPGeneral stress protein 69 / 0.657
4dz5 NAPAldo-keto reductase family 1 member C3 / 0.657
4ej1 FOLDihydrofolate reductase 1.5.1.3 0.656
3q65 NAPAldose reductase 1.1.1.21 0.655
3tqb FOLDihydrofolate reductase / 0.655
1rx2 FOLDihydrofolate reductase 1.5.1.3 0.654
1z9a NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.653
2hej NDPAldo-keto reductase family 1 member C21 1.1.1 0.653
3q67 NAPAldose reductase 1.1.1.21 0.653
3qkz NAPAldose reductase-related protein 1 1.1.1.21 0.653
1ye6 NADNAD(P)H-dependent D-xylose reductase 1.1.1.307 0.652
1ah4 NAPAldose reductase 1.1.1.21 0.650
1lwi NAP3-alpha-hydroxysteroid dehydrogenase 1.1.1.50 0.650