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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1nhw TCC Enoyl-ACP reductase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1nhw TCCEnoyl-ACP reductase / 0.974
1nhg TCLEnoyl-ACP reductase / 0.851
1nnu TCTEnoyl-ACP reductase / 0.818
1uh5 TCLEnoyl-ACP reductase / 0.794
1zw1 TN5Enoyl-ACP reductase / 0.745
3lt1 FT2Enoyl-ACP reductase / 0.745
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
2ol4 JPNEnoyl-ACP reductase / 0.740
3am3 TCLEnoyl-ACP reductase / 0.740
3am5 TCLEnoyl-ACP reductase / 0.734
3lt2 FT3Enoyl-ACP reductase / 0.733
2o2y TCLEnoyl-ACP reductase / 0.726
4e5l DBHPolymerase acidic protein / 0.721
1zxl JP1Enoyl-ACP reductase / 0.713
3lt0 FT1Enoyl-ACP reductase / 0.706
3f4b TCLEnoyl-acyl carrier protein reductase / 0.696
2op1 8PCEnoyl-ACP reductase / 0.687
3am4 FT1Enoyl-ACP reductase / 0.684
3fne 8PCEnoyl-[acyl-carrier-protein] reductase [NADH] 1.3.1.9 0.673
2d09 FLVBiflaviolin synthase CYP158A2 / 0.671
4e5f 0N7Polymerase acidic protein / 0.660
1d7o TCLEnoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic 1.3.1.9 0.659
3lsy FT0Enoyl-ACP reductase / 0.655