scPDB - 1zw1 entry

Protein Data Bank Entry:

PDB ID : 1zw1

Resolution :2.900 Å

Experimental Method : X-ray

Deposition Date : 2005-06-03

Activity from ChEMBL: What is pChEMBL ?

	Min	Mean	Median	Standard Deviation	Max	Count
pChEMBL:

List of CHEMBLId :

Binding Site :

Uniprot Annotation

Name:	Enoyl-ACP reductase
ID:	Q9BH77_PLAFA
AC:	Q9BH77
Organism:	Plasmodium falciparum
Reign:	Eukaryota
TaxID:	5833
EC Number:	/

Chains:

Chain Name:	Percentage of Residues within binding site
A	100 %

Ligand binding site composition:

B-Factor:	28.342
Number of residues:	27
Including
Standard Amino Acids:	26
Non Standard Amino Acids:	1
Water Molecules:	0
Cofactors:	NAD
Metals:

Cavity properties

Ligandability	Volume (Å3)
0.953	627.750

% Hydrophobic	% Polar
59.68	40.32
According to VolSite

Ligand :

HET Code:	TN5
Formula:	C12H9Cl2NO2
Molecular weight:	270.111 g/mol
DrugBank ID:	-
Buried Surface Area:	77.04 %
Polar Surface area:	55.48 Å2

Number of
H-Bond Acceptors:	3
H-Bond Donors:	2
Rings:	2
Aromatic rings:	2
Anionic atoms:	0
Cationic atoms:	0
Rule of Five Violation:	0
Rotatable Bonds:	2

Mass center Coordinates

X	Y	Z
51.1834	92.2171	34.0332

Binding mode :

What is Poseview ?

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Image generated by PoseView

Protein

Binding Site

Ligand

Interaction pattern

hydrophobic (CA)

aromatic (CZ)

hydrogen bond acceptor (O)

hydrogen bond acceptor/donor (OG)

hydrogen bond donor (N)

positively ionized (NZ)

negatively ionized (OD1)

metal (ZN)

Legend:

Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand

Image generated using PoseView by BioSolveIT

Ligand	Protein		Interaction
Atom	Atom	Residue	Distance (Å)	Angle (°)	Type
CL14	CB	ALA- 217	3.67	0	Hydrophobic	false
C2	CB	ALA- 217	3.85	0	Hydrophobic	false
C5	CG2	VAL- 222	4.37	0	Hydrophobic	false
CL13	CZ	TYR- 267	3.34	0	Hydrophobic	false
C7	CB	TYR- 267	4.08	0	Hydrophobic	false
O2	OH	TYR- 277	2.75	158.51	H-Bond (Protein Donor)	false
C7	CE1	TYR- 277	3.42	0	Hydrophobic	false
C5	CG	MET- 281	4.18	0	Hydrophobic	false
C3	CB	ALA- 319	3.89	0	Hydrophobic	false
CL14	CB	ALA- 319	3.28	0	Hydrophobic	false
C2	CB	ALA- 319	3.33	0	Hydrophobic	false
C10	CB	ALA- 320	3.62	0	Hydrophobic	false
C9	CD1	ILE- 323	4.3	0	Hydrophobic	false
C6	CD1	ILE- 323	3.65	0	Hydrophobic	false
C5	CG1	ILE- 323	3.97	0	Hydrophobic	false
C10	CD1	ILE- 323	3.65	0	Hydrophobic	false
CL13	CE2	PHE- 368	3.61	0	Hydrophobic	false
C11	CD1	ILE- 369	4.47	0	Hydrophobic	false
CL13	C4N	NAD- 450	4.44	0	Hydrophobic	false
CL14	C3D	NAD- 450	3.58	0	Hydrophobic	false
C9	C2D	NAD- 450	4.08	0	Hydrophobic	false
C1	C2D	NAD- 450	4.35	0	Hydrophobic	false
O2	O2D	NAD- 450	2.61	131.16	H-Bond (Ligand Donor)	false