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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1g4o BSB Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.891
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.859
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.823
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.815
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.814
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.809
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.805
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.804
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.803
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.803
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.797
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.796
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.795
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.790
1okm SABCarbonic anhydrase 2 4.2.1.1 0.781
3m5e JDRCarbonic anhydrase 2 4.2.1.1 0.781
1bn4 AL9Carbonic anhydrase 2 4.2.1.1 0.778
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.775
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.771
1cny EG3Carbonic anhydrase 2 4.2.1.1 0.771
3n4b WWZCarbonic anhydrase 2 4.2.1.1 0.770
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.768
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.768
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.754
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.753
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.753
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.751
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.750
4bf1 9FKCarbonic anhydrase 2 4.2.1.1 0.750
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.748
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.748
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.747
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.742
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.742
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.741
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.741
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.740
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.739
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.739
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.736
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.735
3mho J43Carbonic anhydrase 2 4.2.1.1 0.734
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.729
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.727
1okn STBCarbonic anhydrase 2 4.2.1.1 0.727
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.727
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.727
1g54 FFBCarbonic anhydrase 2 4.2.1.1 0.726
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.726
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.725
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.724
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.723
4uov AZMCarbonate dehydratase / 0.723
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.721
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.720
1bnu AL3Carbonic anhydrase 2 4.2.1.1 0.718
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.718
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.717
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.716
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.714
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.713
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.713
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.713
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.712
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.711
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.710
4xiw AZMCarbonic anhydrase, alpha type / 0.710
1a42 BZUCarbonic anhydrase 2 4.2.1.1 0.709
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.708
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.708
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.707
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.707
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.705
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.705
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.705
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.704
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.703
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.699
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.699
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.694
1i90 INMCarbonic anhydrase 2 4.2.1.1 0.690
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.690
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.689
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.688
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.686
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.685
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.685
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.682
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.682
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.681
3l14 I7BCarbonic anhydrase 2 4.2.1.1 0.679
4k0t D9ZCarbonic anhydrase 2 4.2.1.1 0.679
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.678
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.675
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.675
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.673
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.666
3f7b AG5Carbonic anhydrase 4 4.2.1.1 0.666
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.665
1bnq AL4Carbonic anhydrase 2 4.2.1.1 0.664
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.663
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.660
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.657
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.657
3da2 4MDCarbonic anhydrase 13 4.2.1.1 0.654
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.653
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.653