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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.605
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.599
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.582
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.575
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.559
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.552
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.551
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.547
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.544
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.542
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.541
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.540
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.538
1vebI05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.537
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.536
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.535
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.532
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.532
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.530
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.530
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.530
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.529
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.525
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.525
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.524
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.523
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.522
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.522
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.521
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.517
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.516
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.510
1xh4R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.509
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.509
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.507
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.504
2uw6GVOcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.503
1xh8R55cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.499
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.497
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.497
2gnlH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.492
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.484
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
3mv5XFERAC-alpha serine/threonine-protein kinase2.7.11.10.461
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.458
2gnhH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
1rejB1LcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.454
3amaSKEcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
4iacACPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.449
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
3l9mL9McAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
1jbpADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
3cqwCQWRAC-alpha serine/threonine-protein kinase2.7.11.10.447
3ambVX6cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.444
3x2wATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.444
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442