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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.638
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.633
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.619
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.617
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.616
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.614
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.614
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.604
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.602
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.600
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.599
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.598
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.598
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.593
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.589
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.588
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.586
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.584
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.569
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.566
2uw6GVOcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.557
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.554
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.553
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.550
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.550
2gnlH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.546
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.543
1vebI05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.541
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.541
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.539
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.538
2uw4L15cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
3ambVX6cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.532
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.531
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.529
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.526
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.525
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.521
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.520
3aglA03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.517
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.517
3amaSKEcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.516
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.515
1xh8R55cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.512
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.512
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.509
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.509
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.508
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.505
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.505
3oogYTPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.505
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.497
1bx6BA1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.496
4c34STUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.489
3bwjARXcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.488
3l9mL9McAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.484
1rejB1LcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.479
1jbpADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.477
2gnhH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.473
2jdvL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.464
2uvzGVJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.463
1xh4R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
1stcSTUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.455
2gnfY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
3x2uATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.451
4iakADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
3cqwCQWRAC-alpha serine/threonine-protein kinase2.7.11.10.447
4ekl0RFRAC-alpha serine/threonine-protein kinase2.7.11.10.446
4xw4ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.445
3kkvB99cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440