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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.614
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.613
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.606
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.601
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.595
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.585
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.578
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.567
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.566
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.564
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.560
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.556
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.554
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.553
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.545
2uw6GVOcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.545
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.541
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.538
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.536
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.536
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.534
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.531
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.527
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.514
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.513
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.512
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.508
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.508
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.506
2uw4L15cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.506
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.503
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.499
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.494
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.492
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.483
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
2gnlH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.476
1vebI05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.475
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.470
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
3aglA03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
3bwjARXcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.464
1xh8R55cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
2uvzGVJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.459
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.451
3amaSKEcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.449
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.448
3cqwCQWRAC-alpha serine/threonine-protein kinase2.7.11.10.447
1xh4R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.445
1rejB1LcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442