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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1rejB1LcAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1rejB1LcAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.601
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.590
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.585
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.569
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.566
1xh8R55cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.557
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.551
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.548
1vebI05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.545
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.545
1bx6BA1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.542
1xh4R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.539
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.538
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.532
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.531
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.531
4yxsEMUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.527
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.526
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.525
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.525
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.524
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.523
3oogYTPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.523
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.522
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.521
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.520
3aglA03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.520
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.514
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.514
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.513
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.508
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.506
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.505
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.502
3dneLL1cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.500
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.498
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.496
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.494
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.489
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.485
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.482
3bwjARXcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.481
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.481
4ekl0RFRAC-alpha serine/threonine-protein kinase2.7.11.10.479
2uzvSS5cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.475
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.474
2gnlH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.473
3kkvB99cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
4iacACPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
4mk029XBeta-adrenergic receptor kinase 12.7.11.150.465
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.464
2gnhH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.462
3amaSKEcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.451
4bcmT7ZCyclin-dependent kinase 22.7.11.220.451
4iazADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.451
4fsuHK5Serine/threonine-protein kinase Chk12.7.11.10.450
2cgu3A3Serine/threonine-protein kinase Chk12.7.11.10.449
3v5w8PRBeta-adrenergic receptor kinase 12.7.11.150.449
3i5zZ48Mitogen-activated protein kinase 12.7.11.240.444
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440