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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3zbtFADFerredoxin--NADP reductase1.18.1.2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3zbtFADFerredoxin--NADP reductase1.18.1.21.000
1gr1FADFerredoxin--NADP reductase1.18.1.20.665
1qh0FADFerredoxin--NADP reductase1.18.1.20.665
1qgyFADFerredoxin--NADP reductase1.18.1.20.662
1bjkFADFerredoxin--NADP reductase1.18.1.20.661
1e64FADFerredoxin--NADP reductase1.18.1.20.654
1h85FADFerredoxin--NADP reductase1.18.1.20.653
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.627
1go2FADFerredoxin--NADP reductase1.18.1.20.624
1w35FADFerredoxin--NADP reductase1.18.1.20.621
4bprFADFerredoxin--NADP reductase1.18.1.20.621
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.619
4c43FADFerredoxin--NADP reductase1.18.1.20.615
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.611
3zc3FADFerredoxin--NADP reductase1.18.1.20.609
1ewyFADFerredoxin--NADP reductase1.18.1.20.608
2b5oFADFerredoxin--NADP reductase1.18.1.20.608
1b2rFADFerredoxin--NADP reductase1.18.1.20.601
1sm4FADFerredoxin--NADP reductase/0.601
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.599
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.595
1gjrFADFerredoxin--NADP reductase1.18.1.20.594
1queFADFerredoxin--NADP reductase1.18.1.20.594
3vo2FADFerredoxin--NADP reductase/0.590
4y9uFADNADPH--cytochrome P450 reductase/0.588
3qfsFADNADPH--cytochrome P450 reductase/0.585
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.580
1e63FADFerredoxin--NADP reductase1.18.1.20.576
1gaqFADFerredoxin/0.572
1e62FADFerredoxin--NADP reductase1.18.1.20.571
3w5uFADFerredoxin/0.570
1ogiFADFerredoxin--NADP reductase1.18.1.20.568
3fpkFADFerredoxin-NADP reductase/0.565
1qgzFADFerredoxin--NADP reductase1.18.1.20.559
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.558
2rc6FADFerredoxin--NADP reductase/0.558
1w87FADFerredoxin--NADP reductase1.18.1.20.555
4yaoFADNADPH--cytochrome P450 reductase/0.555
1gawFADFerredoxin/0.548
1h42FADFerredoxin--NADP reductase1.18.1.20.543
1ogjFADFerredoxin--NADP reductase1.18.1.20.543
1gvhFADFlavohemoprotein/0.539
2ok8FADFerredoxin--NADP reductase, apicoplast/0.538
1ja1FADNADPH--cytochrome P450 reductase/0.536
3qe2FADNADPH--cytochrome P450 reductase/0.535
1amoFADNADPH--cytochrome P450 reductase/0.531
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.523
1tllFADNitric oxide synthase, brain1.14.13.390.522
2bpoFADNADPH--cytochrome P450 reductase/0.510
2piaFMNPhthalate dioxygenase reductase/0.510
4yafFADNADPH--cytochrome P450 reductase/0.510
1f20FADNitric oxide synthase, brain1.14.13.390.507
3ojxFADNADPH--cytochrome P450 reductase/0.506
4k1xFADNADPH:ferredoxin reductase/0.506
3qfcFADNADPH--cytochrome P450 reductase/0.505
2rc5FADFerredoxin--NADP reductase/0.502
4y9rFADNADPH--cytochrome P450 reductase/0.499
4fk8FADFerredoxin--NADP reductase/0.496
1fdrFADFerredoxin--NADP reductase1.18.1.20.492
3qftFADNADPH--cytochrome P450 reductase/0.492
1a8pFADFerredoxin--NADP reductase/0.490
2bgiFADNADPH:ferredoxin reductase/0.487
2xncFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.487
2vnjFADNADPH:ferredoxin reductase/0.486
2bf4FADNADPH--cytochrome P450 reductase/0.481
2vnhFADNADPH:ferredoxin reductase/0.481
1j9zFADNADPH--cytochrome P450 reductase/0.479
2r6hFADNa(+)-translocating NADH-quinone reductase subunit F/0.477
3jqrFADFerredoxin--NADP reductase, apicoplast/0.477
2ok7FADFerredoxin--NADP reductase, apicoplast/0.475
2qdxFADFerredoxin--NADP+ reductase/0.472
3crzFADFerredoxin--NADP+ reductase/0.472
1cqxFADFlavohemoprotein/0.471
2bgjFADNADPH:ferredoxin reductase/0.469
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.469
3qfrFADNADPH--cytochrome P450 reductase/0.466
1krhFADBenzoate 1,2-dioxygenase electron transfer component1.18.1.30.465
1bx0FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.461
2vnkFADNADPH:ferredoxin reductase/0.458
1sq5ADPPantothenate kinase2.7.1.330.457
4b144XBGlycylpeptide N-tetradecanoyltransferase/0.457
1ndhFADNADH-cytochrome b5 reductase 31.6.2.20.454
2cndFADNitrate reductase [NADH]1.7.1.10.453
4a30QMIGlycylpeptide N-tetradecanoyltransferase/0.453
1x1bSAHC-20 methyltransferase/0.451
4yauFADNADPH--cytochrome P450 reductase/0.449
4ge70K5Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.448
1ja0FADNADPH--cytochrome P450 reductase/0.446
1x1cSAHC-20 methyltransferase/0.446
4gdy0X1Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.446
4c3yANB3-ketosteroid dehydrogenase/0.445
2fghATPGelsolin/0.442
3fznD7KBenzoylformate decarboxylase4.1.1.70.442
4bfuZVUPantothenate kinase2.7.1.330.442
4n9qFMNFMN-dependent NADH-azoreductase 1/0.442
2v1aFMNNPH1-1/0.441
3ue6FMNAureochrome1/0.441
4c2z646Glycylpeptide N-tetradecanoyltransferase 1/0.441
1kyxCRM6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.440