Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3pz4 | 3PZ | Protein farnesyltransferase subunit beta | 2.5.1.58 |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
3pz4 | 3PZ | Protein farnesyltransferase subunit beta | 2.5.1.58 | 1.000 | |
1s63 | 778 | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.590 | |
1sa5 | BMV | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.577 | |
1mzc | BNE | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.570 | |
1jcq | 739 | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.568 | |
3e33 | ED7 | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.568 | |
1o1s | 1NH | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.562 | |
1n95 | FTH | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.557 | |
1sa4 | JAN | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.553 | |
3e30 | ED4 | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.553 | |
1ld8 | U49 | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.548 | |
4gto | 7TO | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.537 | |
2h6i | CYS_VAL_LEU_SER_GER | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.531 | |
3ksq | Z96 | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.530 | |
1ld7 | U66 | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.526 | |
3eu5 | GBO | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.518 | |
2r2l | PB9 | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.506 | |
4gtr | 7TR | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.498 | |
1nl4 | HFP | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.488 | |
1n95 | HFP | Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha | / | 0.484 | |
1n95 | HFP | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.484 | |
3sfy | 3FY | Uncharacterized protein | / | 0.460 | |
3q7f | ED2 | Uncharacterized protein | / | 0.459 | |
4gtm | 7TM | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.459 | |
4gtp | 7TP | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.449 | |
2f0y | 3MN | Protein farnesyltransferase subunit beta | 2.5.1.58 | 0.444 | |
3hxf | BD9 | Geranylgeranyl transferase type-2 subunit beta | 2.5.1.60 | 0.441 |