3.000 Å
X-ray
2006-05-31
| Name: | Protein farnesyltransferase subunit beta |
|---|---|
| ID: | FNTB_HUMAN |
| AC: | P49356 |
| Organism: | Homo sapiens |
| Reign: | Eukaryota |
| TaxID: | 9606 |
| EC Number: | 2.5.1.58 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 16 % |
| B | 84 % |
| B-Factor: | 34.739 |
|---|---|
| Number of residues: | 44 |
| Including | |
| Standard Amino Acids: | 42 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | ZN |
| Ligandability | Volume (Å3) |
|---|---|
| 0.882 | 1113.750 |
| % Hydrophobic | % Polar |
|---|---|
| 40.61 | 59.39 |
| According to VolSite | |

| HET Code: | CYS_VAL_LEU_SER_GER |
|---|---|
| Formula: | C17H32N4O6S |
| Molecular weight: | 420.524 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 54.52 % |
| Polar Surface area: | 214.09 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 7 |
| H-Bond Donors: | 6 |
| Rings: | 0 |
| Aromatic rings: | 0 |
| Anionic atoms: | 1 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 1 |
| Rotatable Bonds: | 12 |
| X | Y | Z |
|---|---|---|
| 16.9799 | 132.824 | -3.49385 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| CG2 | CE1 | TYR- 166 | 4.18 | 0 | Hydrophobic |
| CD1 | CZ2 | TRP- 606 | 3.81 | 0 | Hydrophobic |
| CB | CB | ALA- 651 | 3.69 | 0 | Hydrophobic |
| O | NH1 | ARG- 702 | 2.59 | 133.44 | H-Bond (Protein Donor) |
| SG | SG | CYS- 799 | 3.95 | 0 | Hydrophobic |
| CD1 | CZ2 | TRP- 803 | 4.42 | 0 | Hydrophobic |
| CD2 | CZ2 | TRP- 803 | 4.33 | 0 | Hydrophobic |
| CB | CE2 | TYR- 861 | 3.79 | 0 | Hydrophobic |
| CD2 | CE1 | TYR- 861 | 3.58 | 0 | Hydrophobic |