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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3oiaA31Camphor 5-monooxygenase1.14.15.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3oiaA31Camphor 5-monooxygenase1.14.15.11.000
3p6pA6BCamphor 5-monooxygenase1.14.15.10.638
3p6mDSOCamphor 5-monooxygenase1.14.15.10.602
3p6nDSOCamphor 5-monooxygenase1.14.15.10.595
3p6oETGCamphor 5-monooxygenase1.14.15.10.590
1lwlDSOCamphor 5-monooxygenase1.14.15.10.564
1re9DSOCamphor 5-monooxygenase1.14.15.10.543
1rf9DBRCamphor 5-monooxygenase1.14.15.10.494
3pqbVGPPutative oxidoreductase/0.484
2hrcCHDFerrochelatase, mitochondrial4.99.1.10.483
1siqFADGlutaryl-CoA dehydrogenase, mitochondrial1.3.8.60.468
3wv9FEGHmd co-occurring protein HcgE/0.467
2qd4CHDFerrochelatase, mitochondrial4.99.1.10.466
3flkNAITartrate dehydrogenase/decarboxylase1.1.1.930.462
1fm4DXCMajor pollen allergen Bet v 1-L/0.461
3g6zA7TRenin3.4.23.150.461
1s0xC3SNuclear receptor ROR-alpha/0.457
4a84DXCMajor pollen allergen Bet v 1-A/0.455
1e5qNDPSaccharopine dehydrogenase [NADP(+), L-glutamate-forming]1.5.1.100.454
1suiFRECaffeoyl-CoA O-methyltransferase2.1.1.1040.454
2hydADPPutative multidrug export ATP-binding/permease protein SAV18663.6.30.453
4a81DXCMajor pollen allergen Bet v 1-A/0.453
2b37NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.452
3ivcFG4Pantothenate synthetase6.3.2.10.452
4f7iNAD3-isopropylmalate dehydrogenase1.1.1.850.452
2dvlFADAcyl-CoA dehydrogenase/0.451
2znnS44Peroxisome proliferator-activated receptor alpha/0.450
2znq401Peroxisome proliferator-activated receptor delta/0.450
4jbtASDCytochrome P450 monooxygenase/0.450
4irnFADAnaB/0.449
2po7CHDFerrochelatase, mitochondrial4.99.1.10.448
4a83DXCMajor pollen allergen Bet v 1-A/0.448
4xuhSFIPeroxisome proliferator-activated receptor gamma/0.448
2g226IGRenin3.4.23.150.447
4iarERM5-hydroxytryptamine receptor 1B/0.447
4v2gITCTetracycline repressor protein class D/0.446
1iolESTEstradiol 17-beta-dehydrogenase 11.1.1.620.445
1psa0ZLPepsin A3.4.23.10.445
2cciATPCyclin-dependent kinase 22.7.11.220.445
4wuoNAD3-isopropylmalate dehydrogenase1.1.1.850.445
1ppjANYCytochrome b/0.444
2qimZEAClass 10 plant pathogenesis-related protein/0.444
3issEPUUDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.444
3oqkS52Renin3.4.23.150.444
2i4zDRHPeroxisome proliferator-activated receptor gamma/0.443
2uxoTACHTH-type transcriptional regulator TtgR/0.443
3dheANDEstradiol 17-beta-dehydrogenase 11.1.1.620.443
4y9lFADAcyl-CoA dehydrogenase family member 11/0.443
1ia4TQ6Dihydrofolate reductase1.5.1.30.441
2ohiFMNType A flavoprotein FprA10.441
2xc3RT8Steroid C26-monooxygenase1.14.13.1410.441
3vqsJT1Genome polyprotein/0.441
4biiPYWEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.441
4j6dTESCytochrome P450 monooxygenase/0.441
1i5rHYCEstradiol 17-beta-dehydrogenase 11.1.1.620.440
3abaFLICytochrome P450/0.440