2.700 Å
X-ray
2007-03-28
Name: | HTH-type transcriptional regulator TtgR |
---|---|
ID: | TTGR_PSEPT |
AC: | Q9AIU0 |
Organism: | Pseudomonas putida |
Reign: | Bacteria |
TaxID: | 1196325 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 42.779 |
---|---|
Number of residues: | 33 |
Including | |
Standard Amino Acids: | 32 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.488 | 1188.000 |
% Hydrophobic | % Polar |
---|---|
59.38 | 40.63 |
According to VolSite |
HET Code: | TAC |
---|---|
Formula: | C22H22N2O8 |
Molecular weight: | 442.419 g/mol |
DrugBank ID: | DB00759 |
Buried Surface Area: | 54.63 % |
Polar Surface area: | 191.3 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 8 |
H-Bond Donors: | 4 |
Rings: | 4 |
Aromatic rings: | 1 |
Anionic atoms: | 3 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
0.855719 | 34.7776 | 13.3327 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C8 | CG | MET- 89 | 4.4 | 0 | Hydrophobic |
C62 | CD2 | LEU- 92 | 3.41 | 0 | Hydrophobic |
C7 | CD2 | LEU- 92 | 3.62 | 0 | Hydrophobic |
C10 | CD2 | LEU- 93 | 4.26 | 0 | Hydrophobic |
C41 | CG1 | VAL- 96 | 3.84 | 0 | Hydrophobic |
C62 | CG2 | VAL- 96 | 4.42 | 0 | Hydrophobic |
C51 | CG2 | VAL- 96 | 3.86 | 0 | Hydrophobic |
C6 | SG | CYS- 137 | 4.24 | 0 | Hydrophobic |
C8 | CD1 | ILE- 141 | 3.64 | 0 | Hydrophobic |
O1C | O | HOH- 2042 | 3.46 | 179.96 | H-Bond (Protein Donor) |