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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3dk9FADGlutathione reductase, mitochondrial1.8.1.7

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3dk9FADGlutathione reductase, mitochondrial1.8.1.71.000
3dk8FADGlutathione reductase, mitochondrial1.8.1.70.885
3dk4FADGlutathione reductase, mitochondrial1.8.1.70.831
1bwcFADGlutathione reductase, mitochondrial1.8.1.70.630
1greFADGlutathione reductase, mitochondrial1.8.1.70.627
1k4qFADGlutathione reductase, mitochondrial1.8.1.70.621
4gr1FADGlutathione reductase, mitochondrial1.8.1.70.620
1graFADGlutathione reductase, mitochondrial1.8.1.70.612
1grhFADGlutathione reductase, mitochondrial1.8.1.70.608
1grgFADGlutathione reductase, mitochondrial1.8.1.70.607
3grsFADGlutathione reductase, mitochondrial1.8.1.70.607
1gsnFADGlutathione reductase, mitochondrial1.8.1.70.597
2gh5FADGlutathione reductase, mitochondrial1.8.1.70.561
3sqpFADGlutathione reductase, mitochondrial1.8.1.70.559
2v6oFADThioredoxin glutathione reductase/0.549
1grbFADGlutathione reductase, mitochondrial1.8.1.70.540
3dgzFADThioredoxin reductase 2, mitochondrial1.8.1.90.527
2nvkFADThioredoxin reductase 1, mitochondrial1.8.1.90.521
2r9zFADGlutathione amide reductase/0.503
2rabFADGlutathione amide reductase/0.480
4kprFADThioredoxin reductase 1, cytoplasmic1.8.1.90.466
2cfyFADThioredoxin reductase 1, cytoplasmic1.8.1.90.462
1gerFADGlutathione reductase1.8.1.70.461
2j3nFADThioredoxin reductase 1, cytoplasmic1.8.1.90.461
1zk7FADMercuric reductase1.16.1.10.459
1lvlFADDihydrolipoyl dehydrogenase1.8.1.40.457
3djgFADGlutathione reductase, mitochondrial1.8.1.70.453
3qfbFADThioredoxin reductase 1, cytoplasmic1.8.1.90.450