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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2pvjP44Casein kinase II subunit alpha2.7.11.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2pvjP44Casein kinase II subunit alpha2.7.11.11.000
2pvlP55Casein kinase II subunit alpha2.7.11.10.666
2pvnP63Casein kinase II subunit alpha2.7.11.10.621
2pvmP29Casein kinase II subunit alpha2.7.11.10.614
1lp4ANPCasein kinase II subunit alpha2.7.11.10.585
1dayGNPCasein kinase II subunit alpha2.7.11.10.562
2pvhP19Casein kinase II subunit alpha2.7.11.10.551
3at3ATKCasein kinase II subunit alpha2.7.11.10.549
2pvkP45Casein kinase II subunit alpha2.7.11.10.542
3be9P04Casein kinase II subunit alpha2.7.11.10.536
4dgnLU2Casein kinase II subunit alpha2.7.11.10.518
4gub0Y4Casein kinase II subunit alpha2.7.11.10.514
5cvhADPCasein kinase II subunit alpha2.7.11.10.512
3q9xEMOCasein kinase II subunit alpha2.7.11.10.507
1m2rMNYCasein kinase II subunit alpha2.7.11.10.502
1dawANPCasein kinase II subunit alpha2.7.11.10.500
4dgmAGICasein kinase II subunit alpha2.7.11.10.497
4lfiGNPCasein kinase II subunit alpha2.7.11.10.496
3ofm4B0Casein kinase II subunit alpha'2.7.11.10.490
4anmWULCasein kinase II subunit alpha2.7.11.10.484
4jqeANPCasein kinase II subunit alpha2.7.11.10.477
4grb0XGCasein kinase II subunit alpha2.7.11.10.476
1om1IQACasein kinase II subunit alpha2.7.11.10.473
4dgo0JWCasein kinase II subunit alpha2.7.11.10.469
1m2pHNACasein kinase II subunit alpha2.7.11.10.467
4jr7GNPCasein kinase II subunit alpha2.7.11.10.467
1m2qMNXCasein kinase II subunit alpha2.7.11.10.465
3u4uLNHCasein kinase II subunit alpha2.7.11.10.462
2g226IGRenin3.4.23.150.456
2cdz23DSerine/threonine-protein kinase PAK 42.7.11.10.455
3lpbNVBTyrosine-protein kinase JAK2/0.455
1h66FADNAD(P)H dehydrogenase [quinone] 11.6.5.20.453
3i4bZ48Glycogen synthase kinase-3 beta2.7.11.260.453
4bf2STUMitogen-activated protein kinase kinase kinase 52.7.11.250.452
3mfsANPPeripheral plasma membrane protein CASK2.7.11.10.451
3oqfS51Renin3.4.23.150.451
3p23ADPSerine/threonine-protein kinase/endoribonuclease IRE12.7.11.10.450
2hy81STSerine/threonine-protein kinase PAK 12.7.11.10.449
1q41IXMGlycogen synthase kinase-3 beta2.7.11.260.447
3pe2E1BCasein kinase II subunit alpha2.7.11.10.447
4fi1ATPCasein kinase II subunit alpha2.7.11.10.447
2i4qUA4Renin3.4.23.150.446
4mwhATPCasein kinase II subunit alpha2.7.11.10.446
2vv9IM9Cyclin-dependent kinase 22.7.11.220.445
3oqkS52Renin3.4.23.150.445
1bil0IURenin3.4.23.150.443
2nrySTUInterleukin-1 receptor-associated kinase 42.7.11.10.443
4btjATPTau-tubulin kinase 12.7.11.10.443
2clqSTUMitogen-activated protein kinase kinase kinase 52.7.11.250.440