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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1zw1TN5Enoyl-ACP reductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1zw1TN5Enoyl-ACP reductase/1.000
2ol4JPNEnoyl-ACP reductase/0.541
1nnuTCTEnoyl-ACP reductase/0.536
3lt1FT2Enoyl-ACP reductase/0.532
4igeCHJEnoyl-acyl carrier reductase/0.529
3lt0FT1Enoyl-ACP reductase/0.528
2o2sTCLEnoyl-acyl carrier reductase/0.518
1nhwTCCEnoyl-ACP reductase/0.517
1zxlJP1Enoyl-ACP reductase/0.515
2o2yTCLEnoyl-ACP reductase/0.514
1zsnTN2Enoyl-ACP reductase/0.510
1nhgTCLEnoyl-ACP reductase/0.508
2foiJPAEnoyl-acyl carrier reductase/0.507
3lt2FT3Enoyl-ACP reductase/0.506
3f4bTCLEnoyl-acyl carrier protein reductase/0.501
3nj8NJ8Enoyl-acyl carrier reductase/0.498
1uh5TCLEnoyl-ACP reductase/0.497
3am3TCLEnoyl-ACP reductase/0.496
3fnhJPJEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.489
3lsyFT0Enoyl-ACP reductase/0.489
3am4FT1Enoyl-ACP reductase/0.479
3fne8PCEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.476
5cp8TCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.473
3am5TCLEnoyl-ACP reductase/0.467
5coqTCUEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.465
3uic09TEnoyl-[acyl-carrier-protein] reductase [NADH]/0.463
2op07PCEnoyl-ACP reductase/0.455
3nrcTCLEnoyl-[acyl-carrier-protein] reductase [NADH]/0.454
2ntvP1HEnoyl-[acyl-carrier-protein] reductase [NADH]/0.452
2cmjNAPIsocitrate dehydrogenase [NADP] cytoplasmic1.1.1.420.446
2nsd4PIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.446
1kqnNADNicotinamide/nicotinic acid mononucleotide adenylyltransferase 12.7.7.10.443
1n83CLRNuclear receptor ROR-alpha/0.441
1kr2TADNicotinamide/nicotinic acid mononucleotide adenylyltransferase 12.7.7.10.440
2fgjATPAlpha-hemolysin translocation ATP-binding protein HlyB/0.440