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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1w87FADFerredoxin--NADP reductase1.18.1.2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1w87FADFerredoxin--NADP reductase1.18.1.21.000
3zc3FADFerredoxin--NADP reductase1.18.1.20.605
1gjrFADFerredoxin--NADP reductase1.18.1.20.573
1amoFADNADPH--cytochrome P450 reductase/0.558
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.558
1go2FADFerredoxin--NADP reductase1.18.1.20.557
3vo2FADFerredoxin--NADP reductase/0.557
3fpkFADFerredoxin-NADP reductase/0.554
3qfcFADNADPH--cytochrome P450 reductase/0.552
4bprFADFerredoxin--NADP reductase1.18.1.20.552
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.551
1w35FADFerredoxin--NADP reductase1.18.1.20.549
1qgyFADFerredoxin--NADP reductase1.18.1.20.546
1gawFADFerredoxin/0.545
1qh0FADFerredoxin--NADP reductase1.18.1.20.544
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.541
1h85FADFerredoxin--NADP reductase1.18.1.20.541
1e64FADFerredoxin--NADP reductase1.18.1.20.539
4y9rFADNADPH--cytochrome P450 reductase/0.539
4yafFADNADPH--cytochrome P450 reductase/0.539
3w5uFADFerredoxin/0.536
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.535
4y9uFADNADPH--cytochrome P450 reductase/0.532
1sm4FADFerredoxin--NADP reductase/0.530
3qe2FADNADPH--cytochrome P450 reductase/0.530
4c43FADFerredoxin--NADP reductase1.18.1.20.527
4yaoFADNADPH--cytochrome P450 reductase/0.527
1gaqFADFerredoxin/0.526
1queFADFerredoxin--NADP reductase1.18.1.20.525
1h42FADFerredoxin--NADP reductase1.18.1.20.524
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.523
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.522
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.522
3zbtFADFerredoxin--NADP reductase1.18.1.20.519
2ok8FADFerredoxin--NADP reductase, apicoplast/0.516
1bjkFADFerredoxin--NADP reductase1.18.1.20.515
1ja1FADNADPH--cytochrome P450 reductase/0.513
1e63FADFerredoxin--NADP reductase1.18.1.20.510
1ewyFADFerredoxin--NADP reductase1.18.1.20.510
3qfsFADNADPH--cytochrome P450 reductase/0.507
2b5oFADFerredoxin--NADP reductase1.18.1.20.504
2rc6FADFerredoxin--NADP reductase/0.502
1b2rFADFerredoxin--NADP reductase1.18.1.20.496
2xncFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.490
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.489
1qgzFADFerredoxin--NADP reductase1.18.1.20.485
1ogiFADFerredoxin--NADP reductase1.18.1.20.483
3qftFADNADPH--cytochrome P450 reductase/0.482
1gvhFADFlavohemoprotein/0.481
4y7cFADNADPH--cytochrome P450 reductase/0.481
1f20FADNitric oxide synthase, brain1.14.13.390.480
2rc5FADFerredoxin--NADP reductase/0.477
1e62FADFerredoxin--NADP reductase1.18.1.20.476
1j9zFADNADPH--cytochrome P450 reductase/0.472
1ja1FMNNADPH--cytochrome P450 reductase/0.471
3ojxFADNADPH--cytochrome P450 reductase/0.470
4yauFADNADPH--cytochrome P450 reductase/0.469
3ojwFMNNADPH--cytochrome P450 reductase/0.467
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.467
1ogjFADFerredoxin--NADP reductase1.18.1.20.465
1fdrFADFerredoxin--NADP reductase1.18.1.20.463
4a30QMIGlycylpeptide N-tetradecanoyltransferase/0.463
1gr1FADFerredoxin--NADP reductase1.18.1.20.461
4cax646Glycylpeptide N-tetradecanoyltransferase2.3.1.970.461
2bf4FADNADPH--cytochrome P450 reductase/0.458
2bpoFADNADPH--cytochrome P450 reductase/0.457
4a312CBGlycylpeptide N-tetradecanoyltransferase/0.456
3jqrFADFerredoxin--NADP reductase, apicoplast/0.455
2bn4FMNNADPH--cytochrome P450 reductase/0.453
3pm1ETHTH-type transcriptional regulator QacR/0.451
1kyvRBF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.449
4a2zVIQGlycylpeptide N-tetradecanoyltransferase/0.449
2cndFADNitrate reductase [NADH]1.7.1.10.448
1krhFADBenzoate 1,2-dioxygenase electron transfer component1.18.1.30.447
2bgjFADNADPH:ferredoxin reductase/0.447
1bx0FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.446
1h69ARHNAD(P)H dehydrogenase [quinone] 11.6.5.20.446
1ptjNAPNAD(P) transhydrogenase subunit beta1.6.1.20.446
2vbdV10Isopenicillin N synthase1.21.3.10.446
2wsa646Glycylpeptide N-tetradecanoyltransferase/0.445
1tllFADNitric oxide synthase, brain1.14.13.390.443
4bfwZVWPantothenate kinase2.7.1.330.442
1kbo340NAD(P)H dehydrogenase [quinone] 11.6.5.20.441
1xoqROFcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.441
2piaFMNPhthalate dioxygenase reductase/0.441
1xddAAYIntegrin alpha-L/0.440