Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
5kf8 ACO Predicted acetyltransferase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
5kf8 ACOPredicted acetyltransferase / 1.273
5kf9 ACOPredicted acetyltransferase / 1.268
5kf2 ACOPredicted acetyltransferase / 1.248
5kgp ACOPredicted acetyltransferase / 1.215
5kgj ACOPredicted acetyltransferase / 1.195
5kf1 ACOPredicted acetyltransferase / 1.124
5kgh ACOPredicted acetyltransferase / 1.096
2cns ACORibosomal-protein-alanine acetyltransferase / 0.919
4hkf ACOAlpha-tubulin N-acetyltransferase 1 / 0.891
2jdc CAOProbable acetyltransferase / 0.887
2r8v ACOAmino-acid acetyltransferase / 0.885
2bsw CAOProbable acetyltransferase / 0.884
4ag7 COAGlucosamine 6-phosphate N-acetyltransferase / 0.879
1n71 COAAac(6')-Ii protein / 0.876
1ghe ACOAcetyltransferase 2.3.1 0.871
1wwz ACOUncharacterized protein / 0.871
2fiw ACOGCN5-related N-acetyltransferase:Aminotransferase, class-II / 0.862
2jdd ACOProbable acetyltransferase / 0.860
2vez ACOGlucosamine 6-phosphate acetyltransferase, putative / 0.850
1bob ACOHistone acetyltransferase type B catalytic subunit / 0.838
4lx9 ACON-alpha-acetyltransferase 2.3.1 0.837
1z4r ACOHistone acetyltransferase KAT2A 2.3.1.48 0.830
4u9v ACON-alpha-acetyltransferase 40 2.3.1 0.830
2a4n COAAac(6')-Ii protein / 0.827
2rc4 ACOHistone acetyltransferase KAT6A / 0.819
1ozp ACOMycothiol acetyltransferase 2.3.1.189 0.811
5h86 BCOHistone acetyltransferase KAT2A 2.3.1.48 0.811
1j4j ACOAcetyltransferase 2.3.1 0.808
2zpa ACOtRNA(Met) cytidine acetyltransferase TmcA / 0.807
3exn ACOProbable acetyltransferase / 0.807
3te4 ACODopamine N-acetyltransferase / 0.806
1b87 ACOAac(6')-Ii protein / 0.805
3k9u ACOSpermidine N(1)-acetyltransferase / 0.805
4b5p ACOAlpha-tubulin N-acetyltransferase 1 / 0.805
5h84 1VUHistone acetyltransferase KAT2A 2.3.1.48 0.802
1qsr ACOHAT A1 / 0.794
2vxk COAGlucosamine 6-phosphate acetyltransferase, putative / 0.794
4r3k COAN-alpha-acetyltransferase 2.3.1 0.792
1cjw COTSerotonin N-acetyltransferase / 0.791
3gy9 COAGCN5-related N-acetyltransferase / 0.791
1kuv CA5Serotonin N-acetyltransferase / 0.787
3s6f COAUncharacterized protein / 0.787
4zm6 ACON-acetyl-beta-D glucosaminidase / 0.786
1l0c COTSerotonin N-acetyltransferase / 0.785
4gs4 ACOAlpha-tubulin N-acetyltransferase 1 / 0.785
2b3v ACODiamine acetyltransferase 1 / 0.784
1p0h COAMycothiol acetyltransferase 2.3.1.189 0.776
3gya COAGCN5-related N-acetyltransferase / 0.776
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.774
2x7b COAN-alpha-acetyltransferase 2.3.1 0.773
2bei ACODiamine acetyltransferase 2 2.3.1.57 0.768
2cy2 ACOProbable acetyltransferase / 0.763
3to6 LYS_CMCHistone acetyltransferase ESA1 / 0.762
1pu9 COAHAT A1 / 0.758
2ou2 ACOHistone acetyltransferase KAT5 / 0.758
1qsn COAHAT A1 / 0.756
2c27 ACOMycothiol acetyltransferase 2.3.1.189 0.756
3d2m COAAmino-acid acetyltransferase / 0.753
2vbq BSJAminoglycoside N(6')-acetyltransferase type 1 / 0.751
4ua3 COAN-alpha-acetyltransferase 40 2.3.1 0.749
3pgp ACOUncharacterized protein / 0.747
1ib1 COTSerotonin N-acetyltransferase / 0.744
1pua COAHAT A1 / 0.743
3sxn COAN-acetyltransferase Eis / 0.743
3r1k COAN-acetyltransferase Eis / 0.738
1tiq COASpermidine/spermine N(1)-acetyltransferase / 0.736
1i12 ACOGlucosamine 6-phosphate N-acetyltransferase / 0.729
1p0h ACOMycothiol acetyltransferase 2.3.1.189 0.728
4kub COAUncharacterized protein / 0.727
1mj9 COAHistone acetyltransferase ESA1 / 0.726
1fy7 COAHistone acetyltransferase ESA1 / 0.725
4h6z ACOAlpha-tubulin N-acetyltransferase 1 / 0.725
2q4v ACODiamine acetyltransferase 2 2.3.1.57 0.718
3bj7 COADiamine acetyltransferase 1 / 0.717
3f0a ACOSpermidine N(1)-acetyltransferase / 0.717
1qsm ACOHistone acetyltransferase HPA2 / 0.715
2fxf ACODiamine acetyltransferase 1 / 0.709
4mxe ACON-acetyltransferase ESCO1 2.3.1 0.709
2prb COAAminoglycoside 6-N-acetyltransferase type Ib11 / 0.708
5kf2 COAPredicted acetyltransferase / 0.708
4qvt ACOAcetyltransferase YpeA 2.3.1 0.707
4jwp ACOGCN5-related N-acetyltransferase / 0.706
4u9z COAAlpha-tubulin N-acetyltransferase 1 / 0.706
1mjb ACOHistone acetyltransferase ESA1 / 0.703
2y0m ACOHistone acetyltransferase KAT8 / 0.702
5ag7 MYAGlycylpeptide N-tetradecanoyltransferase / 0.701
3vwd ACOAlpha-tubulin N-acetyltransferase 1 / 0.700
4if5 ACOAlpha-tubulin N-acetyltransferase 1 / 0.700
1kux CA3Serotonin N-acetyltransferase / 0.695
1mja COAHistone acetyltransferase ESA1 / 0.693
4u9y COAAlpha-tubulin N-acetyltransferase 1 / 0.692
4ag9 COAGlucosamine 6-phosphate N-acetyltransferase / 0.691
3cz7 ACOHistone acetyltransferase RTT109 2.3.1.48 0.690
3vwe COAAlpha-tubulin N-acetyltransferase 1 / 0.690
1s5k COAAminoglycoside N(6')-acetyltransferase type 1 / 0.688
2psw COAN-alpha-acetyltransferase 50 / 0.686
2zfn ACOHistone acetyltransferase RTT109 2.3.1.48 0.683
3r96 ACOMccE protein / 0.682
4b5o ACOAlpha-tubulin N-acetyltransferase 1 / 0.680
1kuy COTSerotonin N-acetyltransferase / 0.677
1m1d LYXHAT A1 / 0.677
3r95 ACOMccE protein / 0.677
2ge3 ACOProbable acetyltransferase / 0.675
2qir COAAminoglycoside 6-N-acetyltransferase type Ib11 / 0.673
2giv ACOHistone acetyltransferase KAT8 / 0.671
2jev NHQDiamine acetyltransferase 1 / 0.671
4ri1 ACOUDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 2.3.1.202 0.669
2bue COAAAC(6')-Ib / 0.666
4xpd ACON-terminal acetyltransferase A complex subunit NAT5 2.3.1 0.665
5kf1 COAPredicted acetyltransferase / 0.665
4jxr ACOAcetyltransferase / 0.660
2ob0 ACON-alpha-acetyltransferase 50 / 0.658
2vzz SCAPutative succinyl-CoA transferase Rv0802c 2.8.3 0.657
3zj0 ACOPutative acetyltransferase OgpAT / 0.657
2ft0 ACOdTDP-fucosamine acetyltransferase / 0.651