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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4pgt GBX Glutathione S-transferase P 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4pgt GBXGlutathione S-transferase P 2.5.1.18 1.318
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.999
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.988
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.987
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.974
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.962
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.924
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.917
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.883
9gss GTXGlutathione S-transferase P 2.5.1.18 0.860
4gss GTXGlutathione S-transferase P 2.5.1.18 0.843
17gs GTXGlutathione S-transferase P 2.5.1.18 0.835
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.832
2j9h GTXGlutathione S-transferase P 2.5.1.18 0.824
12gs 0HHGlutathione S-transferase P 2.5.1.18 0.823
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.785
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.783
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.777
1gss LEEGlutathione S-transferase P 2.5.1.18 0.754
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.751
1q4j GTXGlutathione S-transferase 2.5.1.18 0.750
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.740
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.738
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.727
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.724
2aaw GTXGlutathione S-transferase 2.5.1.18 0.723
3ktl GTXGlutathione S-transferase A1 2.5.1.18 0.713
6gsv GPSGlutathione S-transferase Mu 1 2.5.1.18 0.709
3ik7 BOBGlutathione S-transferase A4 2.5.1.18 0.707
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.705
1pl1 ABYGlutathione S-transferase A1 2.5.1.18 0.702
1vf2 GTXGlutathione S-transferase 3 2.5.1.18 0.699
3g7j GTXGlutathione transferase GST1-4 / 0.699
2gsq GBIGlutathione S-transferase 2.5.1.18 0.698
1ml6 GBXGlutathione S-transferase A2 2.5.1.18 0.696
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.686
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 0.684
6gsx GPSGlutathione S-transferase Mu 1 2.5.1.18 0.684
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.681
1m9a GTXGlutathione S-transferase class-mu 26 kDa isozyme 2.5.1.18 0.676
2gst GPSGlutathione S-transferase Mu 1 2.5.1.18 0.676
3frc 0HGGlutathione S-transferase 2.5.1.18 0.672
2imk GTXAGAP009194-PA / 0.665
6gsu GPSGlutathione S-transferase Mu 1 2.5.1.18 0.662
1gnw GTXGlutathione S-transferase F2 2.5.1.18 0.659
3fyg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.657
6gsw GPSGlutathione S-transferase Mu 1 2.5.1.18 0.652
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.650