2.600 Å
X-ray
1998-10-14
| Name: | Glutathione S-transferase F2 |
|---|---|
| ID: | GSTF2_ARATH |
| AC: | P46422 |
| Organism: | Arabidopsis thaliana |
| Reign: | Eukaryota |
| TaxID: | 3702 |
| EC Number: | 2.5.1.18 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 22.987 |
|---|---|
| Number of residues: | 34 |
| Including | |
| Standard Amino Acids: | 32 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 2 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 1.049 | 398.250 |
| % Hydrophobic | % Polar |
|---|---|
| 59.32 | 40.68 |
| According to VolSite | |

| HET Code: | GLY_GGL_FOE |
|---|---|
| Formula: | C21H28FN4O7S |
| Molecular weight: | 499.533 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 45.06 % |
| Polar Surface area: | 211.7 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 8 |
| H-Bond Donors: | 3 |
| Rings: | 1 |
| Aromatic rings: | 1 |
| Anionic atoms: | 2 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 1 |
| Rotatable Bonds: | 14 |
| X | Y | Z |
|---|---|---|
| 16.8038 | 30.3884 | 21.4741 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C1 | CB | SER- 10 | 3.93 | 0 | Hydrophobic |
| CB | CB | SER- 10 | 4.07 | 0 | Hydrophobic |
| O3 | N | ILE- 11 | 3.35 | 151.47 | H-Bond (Protein Donor) |
| C7 | CD1 | ILE- 11 | 3.82 | 0 | Hydrophobic |
| CG | CB | ALA- 12 | 3.95 | 0 | Hydrophobic |
| O | NZ | LYS- 40 | 3.35 | 0 | Ionic (Protein Cationic) |
| CG | CB | GLN- 52 | 4.2 | 0 | Hydrophobic |
| N | O | VAL- 53 | 2.85 | 129.22 | H-Bond (Ligand Donor) |
| O | N | VAL- 53 | 2.78 | 163.97 | H-Bond (Protein Donor) |
| CB | CG2 | VAL- 53 | 3.6 | 0 | Hydrophobic |
| N | OE2 | GLU- 65 | 3.05 | 0 | Ionic (Ligand Cationic) |
| O | N | SER- 66 | 2.99 | 165.88 | H-Bond (Protein Donor) |
| OXT | OG | SER- 66 | 2.63 | 151.04 | H-Bond (Protein Donor) |
| OXT | NH1 | ARG- 67 | 3.36 | 125.77 | H-Bond (Protein Donor) |
| C7 | CB | SER- 114 | 4.18 | 0 | Hydrophobic |
| C5 | CB | PHE- 118 | 4.35 | 0 | Hydrophobic |
| C5 | CZ | PHE- 122 | 3.31 | 0 | Hydrophobic |
| O | O | HOH- 253 | 3.08 | 160.28 | H-Bond (Protein Donor) |