Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3wrh CAM Camphor 5-monooxygenase 1.14.15.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3wrh CAMCamphor 5-monooxygenase 1.14.15.1 0.815
3wrm CAMCamphor 5-monooxygenase 1.14.15.1 0.810
3fwg CAMCamphor 5-monooxygenase 1.14.15.1 0.804
3wrl CAMCamphor 5-monooxygenase 1.14.15.1 0.803
3fwj CAMCamphor 5-monooxygenase 1.14.15.1 0.799
3l63 CAMCamphor 5-monooxygenase 1.14.15.1 0.795
3fwi CAMCamphor 5-monooxygenase 1.14.15.1 0.791
1t85 CAMCamphor 5-monooxygenase 1.14.15.1 0.787
1yrc CAMCamphor 5-monooxygenase 1.14.15.1 0.785
4ek1 CAMCamphor 5-monooxygenase 1.14.15.1 0.783
4g3r CAMCamphor 5-monooxygenase 1.14.15.1 0.783
2cpp CAMCamphor 5-monooxygenase 1.14.15.1 0.782
2zui CAMCamphor 5-monooxygenase 1.14.15.1 0.782
1t86 CAMCamphor 5-monooxygenase 1.14.15.1 0.781
5cp4 CAMCamphor 5-monooxygenase 1.14.15.1 0.778
4l4a CAMCamphor 5-monooxygenase 1.14.15.1 0.772
4l49 CAMCamphor 5-monooxygenase 1.14.15.1 0.769
1dz4 CAMCamphor 5-monooxygenase 1.14.15.1 0.768
1uyu CAMCamphor 5-monooxygenase 1.14.15.1 0.768
4l4b CAMCamphor 5-monooxygenase 1.14.15.1 0.761
1dz6 CAMCamphor 5-monooxygenase 1.14.15.1 0.760
2qbn CAMCamphor 5-monooxygenase 1.14.15.1 0.756
1t87 CAMCamphor 5-monooxygenase 1.14.15.1 0.748
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.744
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
1m3q ANGN-glycosylase/DNA lyase 3.2.2 0.744
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.744
2puc GUNHTH-type transcriptional repressor PurR / 0.744
2zaw CAMCamphor 5-monooxygenase 1.14.15.1 0.721
4l4e CAMCamphor 5-monooxygenase 1.14.15.1 0.712
4l4f CAMCamphor 5-monooxygenase 1.14.15.1 0.712
4l4c CAMCamphor 5-monooxygenase 1.14.15.1 0.707
4l4d CAMCamphor 5-monooxygenase 1.14.15.1 0.698
3wrj CAMCamphor 5-monooxygenase 1.14.15.1 0.691
2a1m CAMCamphor 5-monooxygenase 1.14.15.1 0.678
1phg MYTCamphor 5-monooxygenase 1.14.15.1 0.662
1ozq PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1p0e PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1ulb GUNPurine nucleoside phosphorylase 2.4.2.1 0.660
2pot GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
2pwu GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
2z1x PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
3bld PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4gcx PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4h7z GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4hqv QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4hvx QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
2z97 CAMCamphor 5-monooxygenase 1.14.15.1 0.654