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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3vs7 KS1 Tyrosine-protein kinase HCK 2.7.10.2

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3vs7 KS1Tyrosine-protein kinase HCK 2.7.10.2 0.815
4e5i 0N9Polymerase acidic protein / 0.744
2c0i L1GTyrosine-protein kinase HCK 2.7.10.2 0.732
1yol S03Proto-oncogene tyrosine-protein kinase Src 2.7.10.2 0.723
2c0t L3GTyrosine-protein kinase HCK 2.7.10.2 0.716
3vs5 VSGTyrosine-protein kinase HCK 2.7.10.2 0.716
3vs4 VSFTyrosine-protein kinase HCK 2.7.10.2 0.711
3vs1 VSATyrosine-protein kinase HCK 2.7.10.2 0.709
3vry B43Tyrosine-protein kinase HCK 2.7.10.2 0.697
1qcf PP1Tyrosine-protein kinase HCK 2.7.10.2 0.685
1ad5 ANPTyrosine-protein kinase HCK 2.7.10.2 0.677
3vs2 VSBTyrosine-protein kinase HCK 2.7.10.2 0.677
1qpe PP2Tyrosine-protein kinase Lck 2.7.10.2 0.676
3dqw AGSProto-oncogene tyrosine-protein kinase Src 2.7.10.2 0.676
3vrz VRZTyrosine-protein kinase HCK 2.7.10.2 0.673
1jpa ANPEphrin type-B receptor 2 2.7.10.1 0.672
2cgw 3C3Serine/threonine-protein kinase Chk1 2.7.11.1 0.663
2z7q ACPRibosomal protein S6 kinase alpha-1 2.7.11.1 0.663
3nyn SGVG protein-coupled receptor kinase 6 2.7.11.16 0.662
2pzr ACPFibroblast growth factor receptor 2 / 0.660
3mvj XFEcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.651
4yuq KS1Calmodulin-like domain protein kinase / 0.651