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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3s8x E59 Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.878
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.823
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.815
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.804
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.799
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.795
1okm SABCarbonic anhydrase 2 4.2.1.1 0.789
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.789
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.789
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.786
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.779
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.776
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.773
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.772
3m67 E36Carbonic anhydrase 2 4.2.1.1 0.771
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.771
3mho J43Carbonic anhydrase 2 4.2.1.1 0.765
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.765
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.764
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.763
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.757
1cny EG3Carbonic anhydrase 2 4.2.1.1 0.756
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.756
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.755
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.754
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.753
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.751
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.749
1cnx EG2Carbonic anhydrase 2 4.2.1.1 0.747
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.746
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.744
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.743
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.742
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.738
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.735
1okn STBCarbonic anhydrase 2 4.2.1.1 0.734
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.733
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.732
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.732
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.729
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.729
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.727
4bf1 9FKCarbonic anhydrase 2 4.2.1.1 0.725
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.724
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.723
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.719
1bnq AL4Carbonic anhydrase 2 4.2.1.1 0.717
3m96 E38Carbonic anhydrase 2 4.2.1.1 0.717
4uov AZMCarbonate dehydratase / 0.717
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.715
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.713
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.710
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.709
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.708
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.707
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.705
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.705
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.704
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.703
4xiw AZMCarbonic anhydrase, alpha type / 0.702
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.701
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.701
2pow I7CCarbonic anhydrase 2 4.2.1.1 0.700
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.699
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.699
1i90 INMCarbonic anhydrase 2 4.2.1.1 0.697
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.697
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.697
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.696
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.696
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.696
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.694
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.693
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.692
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.691
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.689
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.689
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.688
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.686
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.683
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.683
1xq0 4TRCarbonic anhydrase 2 4.2.1.1 0.682
3da2 4MDCarbonic anhydrase 13 4.2.1.1 0.682
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.681
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.679
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.676
2weh FB1Carbonic anhydrase 2 4.2.1.1 0.675
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.674
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.669
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.669
3s9t E49Carbonic anhydrase 2 4.2.1.1 0.668
4kp5 E1FCarbonic anhydrase 12 4.2.1.1 0.668
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.666
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.665
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.665
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.665
3l14 I7BCarbonic anhydrase 2 4.2.1.1 0.663
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.660
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.657
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.657
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.652
3sax E50Carbonic anhydrase 2 4.2.1.1 0.650