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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3f63 GTX Glutathione transferase GST1-4

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3f63 GTXGlutathione transferase GST1-4 / 1.147
1pn9 GTXGlutathione S-transferase 1, isoform D 2.5.1.18 0.858
3g7j GTXGlutathione transferase GST1-4 / 0.804
2imk GTXAGAP009194-PA / 0.771
1k0c GTBTranscriptional regulator URE2 / 0.757
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.740
3frc 0HGGlutathione S-transferase 2.5.1.18 0.734
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 0.733
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.725
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.721
2aaw GTXGlutathione S-transferase 2.5.1.18 0.714
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.711
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.710
1gnw GTXGlutathione S-transferase F2 2.5.1.18 0.705
1hna GDNGlutathione S-transferase Mu 2 2.5.1.18 0.704
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.699
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.695
3ktl GTXGlutathione S-transferase A1 2.5.1.18 0.694
1vf2 GTXGlutathione S-transferase 3 2.5.1.18 0.690
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.687
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.684
2vo4 GTB2,4-D inducible glutathione S-transferase / 0.681
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.675
2f3m GTDGlutathione S-transferase Mu 1 2.5.1.18 0.674
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.673
1m9a GTXGlutathione S-transferase class-mu 26 kDa isozyme 2.5.1.18 0.672
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.668
1gss LEEGlutathione S-transferase P 2.5.1.18 0.665
6gsu GPSGlutathione S-transferase Mu 1 2.5.1.18 0.661
3ik9 BOBGlutathione S-transferase A1 2.5.1.18 0.660
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.659
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.656