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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2x91 LPR Angiotensin-converting enzyme 3.4.15.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2x91 LPRAngiotensin-converting enzyme 3.4.15.1 1.054
2x93 X93Angiotensin-converting enzyme 3.4.15.1 0.966
1uze EALAngiotensin-converting enzyme 3.2.1 0.950
1o86 LPRAngiotensin-converting enzyme 3.2.1 0.946
2x92 X92Angiotensin-converting enzyme 3.4.15.1 0.943
1j36 LPRAngiotensin-converting enzyme 3.4.15.1 0.922
2x90 EALAngiotensin-converting enzyme 3.4.15.1 0.900
2x94 X94Angiotensin-converting enzyme 3.4.15.1 0.882
2x95 X95Angiotensin-converting enzyme 3.4.15.1 0.813
2x97 RX4Angiotensin-converting enzyme 3.4.15.1 0.801
3bkk KAFAngiotensin-converting enzyme 3.2.1 0.750
4ca8 3ESAngiotensin-converting enzyme 3.4.15.1 0.723
2xyd 3ESAngiotensin-converting enzyme 3.2.1 0.715
4ca5 3EFAngiotensin-converting enzyme 3.2.1 0.703
2x96 RX3Angiotensin-converting enzyme 3.4.15.1 0.696
4ca7 3EFAngiotensin-converting enzyme 3.4.15.1 0.692
4ca6 3EFAngiotensin-converting enzyme 3.2.1 0.690
3nxq RX4Angiotensin-converting enzyme 3.2.1 0.679
2oc2 RX3Angiotensin-converting enzyme 3.2.1 0.672
1u4g HPIElastase 3.4.24.26 0.658
2xy9 3ESAngiotensin-converting enzyme 3.2.1 0.658
4bxk 1IUAngiotensin-converting enzyme 3.2.1 0.657