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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Protein Data Bank Entry:

2x91

1.980 Å

X-ray

2010-03-14

Interactomes:
Molecular Function:
Binding Site :

Uniprot Annotation

Name:Angiotensin-converting enzyme
ID:ACE_DROME
AC:Q10714
Organism:Drosophila melanogaster
Reign:Eukaryota
TaxID:7227
EC Number:3.4.15.1


Chains:

Chain Name:Percentage of Residues
within binding site
A100 %


Ligand binding site composition:

B-Factor:24.360
Number of residues:37
Including
Standard Amino Acids: 32
Non Standard Amino Acids: 1
Water Molecules: 4
Cofactors:
Metals: ZN

Cavity properties

LigandabilityVolume (Å3)
0.7811346.625

% Hydrophobic% Polar
31.5868.42
According to VolSite

Ligand :
2x91_1 Structure
HET Code: LPR
Formula: C21H31N3O5
Molecular weight: 405.488 g/mol
DrugBank ID: DB00722
Buried Surface Area:51.39 %
Polar Surface area: 144.82 Å2
Number of
H-Bond Acceptors: 5
H-Bond Donors: 2
Rings: 2
Aromatic rings: 1
Anionic atoms: 2
Cationic atoms: 2
Rule of Five Violation: 0
Rotatable Bonds: 12

Mass center Coordinates

XYZ
28.3998-2.1931443.7739


Binding mode :
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Binding mode
BioSolveIT Image generated by PoseView
Protein
Binding Site
Ligand
Interaction pattern
hydrophobic (CA)
aromatic (CZ)
hydrogen bond acceptor (O)
hydrogen bond acceptor/donor (OG)
hydrogen bond donor (N)
positively ionized (NZ)
negatively ionized (OD1)
metal (ZN)

Legend:

Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand

Image generated using PoseView by BioSolveIT
BioSolveIT


LigandProteinInteraction
AtomAtomResidueDistance
(Å)
Angle (°)Type
O4NE2GLN- 2653.23143.84H-Bond
(Protein Donor)
O5NE2GLN- 2653.17155.1H-Bond
(Protein Donor)
O1NE2HIS- 3372.73144.8H-Bond
(Protein Donor)
N1OALA- 3382.96141.71H-Bond
(Ligand Donor)
C12CBALA- 3384.290Hydrophobic
C10CBALA- 3384.310Hydrophobic
C14CBSER- 3394.430Hydrophobic
C21CBSER- 3393.750Hydrophobic
C10CG2THR- 3644.230Hydrophobic
C12CG2THR- 3643.920Hydrophobic
N1OE2GLU- 3683.45133.61H-Bond
(Ligand Donor)
O5NZLYS- 4952.81171.6H-Bond
(Protein Donor)
O5NZLYS- 4952.810Ionic
(Protein Cationic)
O1NE2HIS- 4972.85146.05H-Bond
(Protein Donor)
C18CG2VAL- 5023.540Hydrophobic
O5OHTYR- 5042.57151.61H-Bond
(Protein Donor)
O2OHTYR- 5072.73167.67H-Bond
(Protein Donor)
O2ZN ZN- 16191.90Metal Acceptor
O3ZN ZN- 16192.590Metal Acceptor
N3OHOH- 22563.11162.44H-Bond
(Ligand Donor)