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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2q1q OSP Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.902
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.792
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.783
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.778
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.778
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.771
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.770
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.764
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.764
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.763
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.763
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.758
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.753
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.752
3mho J43Carbonic anhydrase 2 4.2.1.1 0.752
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.751
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.751
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.749
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.747
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.746
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.743
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.743
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.743
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.742
3oy0 OY0Carbonic anhydrase 2 4.2.1.1 0.742
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.741
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.739
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.736
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.736
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.729
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.729
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.727
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.722
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.720
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.720
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.720
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.719
1okn STBCarbonic anhydrase 2 4.2.1.1 0.719
2pow I7CCarbonic anhydrase 2 4.2.1.1 0.718
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.715
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.715
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.715
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.713
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.713
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.711
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.709
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.704
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.704
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.702
1i90 INMCarbonic anhydrase 2 4.2.1.1 0.701
4xiw AZMCarbonic anhydrase, alpha type / 0.700
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.697
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.697
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.696
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.695
3n4b WWZCarbonic anhydrase 2 4.2.1.1 0.693
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.690
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.686
3daz MZMCarbonic anhydrase 2 4.2.1.1 0.685
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.685
1g54 FFBCarbonic anhydrase 2 4.2.1.1 0.684
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.681
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.681
2wd2 MS5Carbonic anhydrase 2 4.2.1.1 0.677
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.676
3s9t E49Carbonic anhydrase 2 4.2.1.1 0.675
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.674
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.674
1bnq AL4Carbonic anhydrase 2 4.2.1.1 0.672
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.672
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.670
2x7t WZBCarbonic anhydrase 2 4.2.1.1 0.669
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.669
1eou SMSCarbonic anhydrase 2 4.2.1.1 0.668
1xq0 4TRCarbonic anhydrase 2 4.2.1.1 0.667
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.667
4k0t D9ZCarbonic anhydrase 2 4.2.1.1 0.667
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.666
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.662
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.661
1bzm MZMCarbonic anhydrase 1 4.2.1.1 0.659
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.657
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.655
4uov AZMCarbonate dehydratase / 0.655
2weh FB1Carbonic anhydrase 2 4.2.1.1 0.652
3m5e JDRCarbonic anhydrase 2 4.2.1.1 0.652
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.651
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.651
3t84 SG6Carbonic anhydrase 2 4.2.1.1 0.651