Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2nmx M25 Carbonic anhydrase 1 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.857
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.725
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.718
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.716
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.715
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.710
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.706
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.706
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.705
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.703
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.702
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.701
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.701
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.699
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.699
1okm SABCarbonic anhydrase 2 4.2.1.1 0.698
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.698
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.698
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.697
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.697
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.696
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.696
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.695
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.695
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.695
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.693
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.693
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.692
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.691
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.691
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.690
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.689
4uov AZMCarbonate dehydratase / 0.689
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.688
3mho J43Carbonic anhydrase 2 4.2.1.1 0.688
4xiw AZMCarbonic anhydrase, alpha type / 0.688
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.686
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.686
3rz8 RZ8Carbonic anhydrase 2 4.2.1.1 0.685
4ht2 V50Carbonic anhydrase 12 4.2.1.1 0.684
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.683
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.683
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.682
1okn STBCarbonic anhydrase 2 4.2.1.1 0.681
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.681
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.681
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.679
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.678
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.678
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.678
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.678
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.677
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.677
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.676
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.676
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.675
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.675
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.675
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.674
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.674
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.674
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.672
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.672
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.671
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.669
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.668
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.668
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.668
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.667
3mdz EZLCarbonic anhydrase 7 4.2.1.1 0.667
1g54 FFBCarbonic anhydrase 2 4.2.1.1 0.665
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.665
5fl4 9FKCarbonic anhydrase 9 4.2.1.1 0.665
1if5 FBTCarbonic anhydrase 2 4.2.1.1 0.661
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.660
2h15 B19Carbonic anhydrase 2 4.2.1.1 0.660
3daz MZMCarbonic anhydrase 2 4.2.1.1 0.660
1i90 INMCarbonic anhydrase 2 4.2.1.1 0.657
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.657
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.653
4kap 1QVCarbonic anhydrase 2 4.2.1.1 0.653
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.652
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.652
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.651
3n4b WWZCarbonic anhydrase 2 4.2.1.1 0.650
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.650