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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2imk GTX AGAP009194-PA

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2imk GTXAGAP009194-PA / 1.207
3f63 GTXGlutathione transferase GST1-4 / 0.771
1k0c GTBTranscriptional regulator URE2 / 0.769
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.732
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.731
1gnw GTXGlutathione S-transferase F2 2.5.1.18 0.727
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.725
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.720
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 0.719
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.718
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.711
1pn9 GTXGlutathione S-transferase 1, isoform D 2.5.1.18 0.711
3g7j GTXGlutathione transferase GST1-4 / 0.697
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.695
2aaw GTXGlutathione S-transferase 2.5.1.18 0.695
2r3x GTXGlutathione S-transferase A1 2.5.1.18 0.689
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.687
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.685
3ik9 BOBGlutathione S-transferase A1 2.5.1.18 0.685
2vo4 GTB2,4-D inducible glutathione S-transferase / 0.682
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.680
1gwc GTXGlutathione S-transferase 1 / 0.677
4iji 99TGlutathione S-transferase-like protein YibF / 0.677
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.675
4hj2 LZ6Glutathione S-transferase A1 2.5.1.18 0.674
1pl1 ABYGlutathione S-transferase A1 2.5.1.18 0.672
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.665
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.665
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.665
2gsq GBIGlutathione S-transferase 2.5.1.18 0.653