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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2h15 B19 Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2h15 B19Carbonic anhydrase 2 4.2.1.1 0.913
3hku TORCarbonic anhydrase 2 4.2.1.1 0.782
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.715
3f7u AG4Carbonic anhydrase 4 4.2.1.1 0.710
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.700
3t84 SG6Carbonic anhydrase 2 4.2.1.1 0.699
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.695
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.691
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.689
3f7b AG5Carbonic anhydrase 4 4.2.1.1 0.689
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.688
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.688
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.687
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.684
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.680
3daz MZMCarbonic anhydrase 2 4.2.1.1 0.680
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.678
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.678
2wd2 MS5Carbonic anhydrase 2 4.2.1.1 0.677
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.677
3eft 3BSCarbonic anhydrase 2 4.2.1.1 0.674
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.673
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.672
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.666
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.666
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.665
2eu3 FF3Carbonic anhydrase 2 4.2.1.1 0.665
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.662
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.661
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.661
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.660
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.660
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.657
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.656
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.656
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.655
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.655
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.654
1bzm MZMCarbonic anhydrase 1 4.2.1.1 0.653
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.653
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.653
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.651