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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2cpp CAM Camphor 5-monooxygenase 1.14.15.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2cpp CAMCamphor 5-monooxygenase 1.14.15.1 0.828
3fwg CAMCamphor 5-monooxygenase 1.14.15.1 0.803
3fwf CAMCamphor 5-monooxygenase 1.14.15.1 0.802
4cp4 CAMCamphor 5-monooxygenase 1.14.15.1 0.800
3wrm CAMCamphor 5-monooxygenase 1.14.15.1 0.784
4l4a CAMCamphor 5-monooxygenase 1.14.15.1 0.783
3wrh CAMCamphor 5-monooxygenase 1.14.15.1 0.782
1t85 CAMCamphor 5-monooxygenase 1.14.15.1 0.779
3fwj CAMCamphor 5-monooxygenase 1.14.15.1 0.779
3l63 CAMCamphor 5-monooxygenase 1.14.15.1 0.773
3wrl CAMCamphor 5-monooxygenase 1.14.15.1 0.773
2zax CAMCamphor 5-monooxygenase 1.14.15.1 0.772
1yrd CAMCamphor 5-monooxygenase 1.14.15.1 0.767
4l4b CAMCamphor 5-monooxygenase 1.14.15.1 0.765
1geb CAMCamphor 5-monooxygenase 1.14.15.1 0.761
2zaw CAMCamphor 5-monooxygenase 1.14.15.1 0.761
4ek1 CAMCamphor 5-monooxygenase 1.14.15.1 0.761
2zui CAMCamphor 5-monooxygenase 1.14.15.1 0.758
3wrj CAMCamphor 5-monooxygenase 1.14.15.1 0.758
2feu CAMCamphor 5-monooxygenase 1.14.15.1 0.756
3fwi CAMCamphor 5-monooxygenase 1.14.15.1 0.754
4l4c CAMCamphor 5-monooxygenase 1.14.15.1 0.752
2qbn CAMCamphor 5-monooxygenase 1.14.15.1 0.747
4g3r CAMCamphor 5-monooxygenase 1.14.15.1 0.745
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.744
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.744
2puc GUNHTH-type transcriptional repressor PurR / 0.744
4e5l DBHPolymerase acidic protein / 0.744
4ek9 EP4Histone-lysine N-methyltransferase, H3 lysine-79 specific 2.1.1.43 0.744
1uyu CAMCamphor 5-monooxygenase 1.14.15.1 0.719
4l4d CAMCamphor 5-monooxygenase 1.14.15.1 0.719
2a1n CAMCamphor 5-monooxygenase 1.14.15.1 0.718
1dz6 CAMCamphor 5-monooxygenase 1.14.15.1 0.715
4l4e CAMCamphor 5-monooxygenase 1.14.15.1 0.703
4l4f CAMCamphor 5-monooxygenase 1.14.15.1 0.703
2z97 CAMCamphor 5-monooxygenase 1.14.15.1 0.694
4c9p CAMCytochrome P450 / 0.688
2a1m CAMCamphor 5-monooxygenase 1.14.15.1 0.667
1ozq PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1p0e PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1ulb GUNPurine nucleoside phosphorylase 2.4.2.1 0.660
2z1x PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
3bld PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4gcx PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4h7z GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4hqv QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4hvx QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.660