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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2a4n COA Aac(6')-Ii protein

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2a4n COAAac(6')-Ii protein / 1.382
1b87 ACOAac(6')-Ii protein / 1.104
1n71 COAAac(6')-Ii protein / 1.017
2vez ACOGlucosamine 6-phosphate acetyltransferase, putative / 0.904
4u9v ACON-alpha-acetyltransferase 40 2.3.1 0.884
2bei ACODiamine acetyltransferase 2 2.3.1.57 0.859
5kgp ACOPredicted acetyltransferase / 0.855
5kf9 ACOPredicted acetyltransferase / 0.837
5kf1 ACOPredicted acetyltransferase / 0.835
4ag7 COAGlucosamine 6-phosphate N-acetyltransferase / 0.833
5kf8 ACOPredicted acetyltransferase / 0.827
1ib1 COTSerotonin N-acetyltransferase / 0.818
2b3v ACODiamine acetyltransferase 1 / 0.804
2cnt COARibosomal-protein-alanine acetyltransferase / 0.803
5kf2 ACOPredicted acetyltransferase / 0.803
1i12 ACOGlucosamine 6-phosphate N-acetyltransferase / 0.797
4zm6 ACON-acetyl-beta-D glucosaminidase / 0.794
2zpa ACOtRNA(Met) cytidine acetyltransferase TmcA / 0.791
3exn ACOProbable acetyltransferase / 0.788
2cns ACORibosomal-protein-alanine acetyltransferase / 0.785
4r3k COAN-alpha-acetyltransferase 2.3.1 0.784
5kgh ACOPredicted acetyltransferase / 0.782
5kgj ACOPredicted acetyltransferase / 0.781
1qsm ACOHistone acetyltransferase HPA2 / 0.777
2ozu ACOHistone acetyltransferase KAT6A / 0.777
3r1k COAN-acetyltransferase Eis / 0.777
4lx9 ACON-alpha-acetyltransferase 2.3.1 0.777
3tfy COAN-alpha-acetyltransferase 50 2.3.1 0.776
1m4d COAAminoglycoside 2'-N-acetyltransferase 2.3.1 0.774
1bob ACOHistone acetyltransferase type B catalytic subunit / 0.773
4jwp ACOGCN5-related N-acetyltransferase / 0.770
5kf8 COAPredicted acetyltransferase / 0.764
2c27 ACOMycothiol acetyltransferase 2.3.1.189 0.760
2rc4 ACOHistone acetyltransferase KAT6A / 0.757
3pgp ACOUncharacterized protein / 0.757
1l0c COTSerotonin N-acetyltransferase / 0.755
1cjw COTSerotonin N-acetyltransferase / 0.754
2r8v ACOAmino-acid acetyltransferase / 0.754
3te4 ACODopamine N-acetyltransferase / 0.749
1p0h ACOMycothiol acetyltransferase 2.3.1.189 0.747
2y0m ACOHistone acetyltransferase KAT8 / 0.746
3zj0 ACOPutative acetyltransferase OgpAT / 0.745
2vbq BSJAminoglycoside N(6')-acetyltransferase type 1 / 0.743
2cy2 ACOProbable acetyltransferase / 0.742
4hkf ACOAlpha-tubulin N-acetyltransferase 1 / 0.739
1pu9 COAHAT A1 / 0.738
2jdc CAOProbable acetyltransferase / 0.738
3vwe COAAlpha-tubulin N-acetyltransferase 1 / 0.737
3s6f COAUncharacterized protein / 0.736
4qvt ACOAcetyltransferase YpeA 2.3.1 0.735
4crz ACOPanD regulatory factor / 0.734
2psw COAN-alpha-acetyltransferase 50 / 0.733
3gy9 COAGCN5-related N-acetyltransferase / 0.733
3dr8 ACOL-methionine sulfoximine/L-methionine sulfone acetyltransferase / 0.730
4kub COAUncharacterized protein / 0.729
1kuy COTSerotonin N-acetyltransferase / 0.728
4ava ACOAcetyltransferase Pat 2.3.1 0.725
4cs0 ACOPanD regulatory factor / 0.723
2ou2 ACOHistone acetyltransferase KAT5 / 0.719
1tiq COASpermidine/spermine N(1)-acetyltransferase / 0.712
3sxn COAN-acetyltransferase Eis / 0.708
4mxe ACON-acetyltransferase ESCO1 2.3.1 0.706
4kvm SER_ALA_SER_GLU_1XEN-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.704
3k9u ACOSpermidine N(1)-acetyltransferase / 0.700
2bue COAAAC(6')-Ib / 0.697
4ri1 ACOUDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 2.3.1.202 0.697
1fy7 COAHistone acetyltransferase ESA1 / 0.696
1mja COAHistone acetyltransferase ESA1 / 0.695
2vqy ACOAAC(6')-Ib / 0.693
2ge3 ACOProbable acetyltransferase / 0.691
2ob0 ACON-alpha-acetyltransferase 50 / 0.685
1s3z COAAminoglycoside N(6')-acetyltransferase type 1 / 0.683
2x7b COAN-alpha-acetyltransferase 2.3.1 0.683
2jdd ACOProbable acetyltransferase / 0.682
1cm0 COAHistone acetyltransferase KAT2B 2.3.1.48 0.681
2bsw CAOProbable acetyltransferase / 0.680
4jxr ACOAcetyltransferase / 0.678
1bo4 COAAminoglycoside-(3)-N-acetyltransferase / 0.677
3q33 ACOHistone acetyltransferase RTT109 2.3.1.48 0.673
4r87 COASpermidine N(1)-acetyltransferase / 0.671
3to6 LYS_CMCHistone acetyltransferase ESA1 / 0.668
1mjb ACOHistone acetyltransferase ESA1 / 0.666
1wwz ACOUncharacterized protein / 0.666
2vzz SCAPutative succinyl-CoA transferase Rv0802c 2.8.3 0.664
3r95 ACOMccE protein / 0.664
5h86 BCOHistone acetyltransferase KAT2A 2.3.1.48 0.662
1j4j ACOAcetyltransferase 2.3.1 0.661
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.660
4u9z COAAlpha-tubulin N-acetyltransferase 1 / 0.659
1mj9 COAHistone acetyltransferase ESA1 / 0.658
2fxf ACODiamine acetyltransferase 1 / 0.654
1s60 COAAminoglycoside N(6')-acetyltransferase type 1 / 0.653
5kf1 COAPredicted acetyltransferase / 0.650