Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
1xvt | COA | L-carnitine CoA-transferase |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
1xvt | COA | L-carnitine CoA-transferase | / | 1.319 | |
1xvv | CCQ | L-carnitine CoA-transferase | / | 0.967 | |
1xa4 | COA | L-carnitine CoA-transferase | / | 0.921 | |
1vgq | CAO | Formyl-CoA:oxalate CoA-transferase | / | 0.727 | |
1t3z | CAO | Formyl-CoA:oxalate CoA-transferase | / | 0.716 | |
2vjm | COA | Formyl-CoA:oxalate CoA-transferase | / | 0.684 | |
1pt5 | ACO | Formyl-CoA:oxalate CoA-transferase | / | 0.675 | |
1s7n | COA | Acetyl transferase | / | 0.674 | |
3r96 | ACO | MccE protein | / | 0.668 | |
4bhw | 01K | Histone acetyltransferase p300 | / | 0.665 | |
1q6y | COA | Formyl-CoA:oxalate CoA-transferase | / | 0.664 | |
2ozu | ACO | Histone acetyltransferase KAT6A | / | 0.662 | |
3to6 | LYS_CMC | Histone acetyltransferase ESA1 | / | 0.659 | |
2prb | COA | Aminoglycoside 6-N-acetyltransferase type Ib11 | / | 0.658 | |
1wwz | ACO | Uncharacterized protein | / | 0.657 | |
5kf8 | COA | Predicted acetyltransferase | / | 0.657 | |
2ync | YNC | Glycylpeptide N-tetradecanoyltransferase | / | 0.656 | |
4a2z | MYA | Glycylpeptide N-tetradecanoyltransferase | / | 0.656 | |
3r95 | ACO | MccE protein | / | 0.655 | |
2fxf | ACO | Diamine acetyltransferase 1 | / | 0.654 |