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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1vf3 GDN Glutathione S-transferase 3 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 1.219
1vf2 GTXGlutathione S-transferase 3 2.5.1.18 0.977
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.868
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.860
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.857
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.841
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.832
3ik9 BOBGlutathione S-transferase A1 2.5.1.18 0.822
2r3x GTXGlutathione S-transferase A1 2.5.1.18 0.820
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.800
1pl2 ABYGlutathione S-transferase A1 2.5.1.18 0.799
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.797
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.793
4hj2 LZ6Glutathione S-transferase A1 2.5.1.18 0.793
2aaw GTXGlutathione S-transferase 2.5.1.18 0.792
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.792
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.777
1gnw GTXGlutathione S-transferase F2 2.5.1.18 0.759
4gss GTXGlutathione S-transferase P 2.5.1.18 0.757
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.755
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.753
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.749
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.739
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.738
3ik7 BOBGlutathione S-transferase A4 2.5.1.18 0.736
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.734
3f63 GTXGlutathione transferase GST1-4 / 0.725
3g7j GTXGlutathione transferase GST1-4 / 0.718
1pl1 ABYGlutathione S-transferase A1 2.5.1.18 0.708
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.696
1k0c GTBTranscriptional regulator URE2 / 0.691
1ml6 GBXGlutathione S-transferase A2 2.5.1.18 0.690
3ktl GTXGlutathione S-transferase A1 2.5.1.18 0.688
1pn9 GTXGlutathione S-transferase 1, isoform D 2.5.1.18 0.685
2imk GTXAGAP009194-PA / 0.685
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.682
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 0.681
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.679
3frc 0HGGlutathione S-transferase 2.5.1.18 0.675
1gss LEEGlutathione S-transferase P 2.5.1.18 0.673
1gwc GTXGlutathione S-transferase 1 / 0.672
4iji 99TGlutathione S-transferase-like protein YibF / 0.665
2gsq GBIGlutathione S-transferase 2.5.1.18 0.655
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.652
2j9h GTXGlutathione S-transferase P 2.5.1.18 0.650