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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1bx9 GLY_GGL_FOE Glutathione S-transferase F2 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 1.040
1gnw GTXGlutathione S-transferase F2 2.5.1.18 0.750
3f63 GTXGlutathione transferase GST1-4 / 0.733
2imk GTXAGAP009194-PA / 0.719
1pn9 GTXGlutathione S-transferase 1, isoform D 2.5.1.18 0.715
3frc 0HGGlutathione S-transferase 2.5.1.18 0.714
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.709
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.693
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.689
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.686
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.684
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.682
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.681
1k0a GTXTranscriptional regulator URE2 / 0.680
1vf2 GTXGlutathione S-transferase 3 2.5.1.18 0.679
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.678
3ik9 BOBGlutathione S-transferase A1 2.5.1.18 0.674
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.673
17gs GTXGlutathione S-transferase P 2.5.1.18 0.672
1k0c GTBTranscriptional regulator URE2 / 0.672
1pl1 ABYGlutathione S-transferase A1 2.5.1.18 0.670
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.669
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.665
4hj2 LZ6Glutathione S-transferase A1 2.5.1.18 0.665
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.662
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.659
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.658
3ik7 BOBGlutathione S-transferase A4 2.5.1.18 0.658
1pl2 ABYGlutathione S-transferase A1 2.5.1.18 0.657
2j9h GTXGlutathione S-transferase P 2.5.1.18 0.656
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.656
1m9a GTXGlutathione S-transferase class-mu 26 kDa isozyme 2.5.1.18 0.654