Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1b87 ACO Aac(6')-Ii protein

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1b87 ACOAac(6')-Ii protein / 1.341
2a4n COAAac(6')-Ii protein / 1.104
1n71 COAAac(6')-Ii protein / 1.020
2vez ACOGlucosamine 6-phosphate acetyltransferase, putative / 0.927
4u9v ACON-alpha-acetyltransferase 40 2.3.1 0.885
1i12 ACOGlucosamine 6-phosphate N-acetyltransferase / 0.874
2bei ACODiamine acetyltransferase 2 2.3.1.57 0.872
2cy2 ACOProbable acetyltransferase / 0.827
5kf8 ACOPredicted acetyltransferase / 0.805
4ag7 COAGlucosamine 6-phosphate N-acetyltransferase / 0.803
5kf9 ACOPredicted acetyltransferase / 0.792
5kgh ACOPredicted acetyltransferase / 0.773
2q4v ACODiamine acetyltransferase 2 2.3.1.57 0.772
2cnt COARibosomal-protein-alanine acetyltransferase / 0.766
4hkf ACOAlpha-tubulin N-acetyltransferase 1 / 0.765
3exn ACOProbable acetyltransferase / 0.762
5kf1 ACOPredicted acetyltransferase / 0.762
3zj0 ACOPutative acetyltransferase OgpAT / 0.761
1p0h ACOMycothiol acetyltransferase 2.3.1.189 0.755
5kf2 ACOPredicted acetyltransferase / 0.753
5kgp ACOPredicted acetyltransferase / 0.747
1ib1 COTSerotonin N-acetyltransferase / 0.746
3f0a ACOSpermidine N(1)-acetyltransferase / 0.746
1wwz ACOUncharacterized protein / 0.744
4ua3 COAN-alpha-acetyltransferase 40 2.3.1 0.743
5kgj ACOPredicted acetyltransferase / 0.743
2ob0 ACON-alpha-acetyltransferase 50 / 0.739
4jwp ACOGCN5-related N-acetyltransferase / 0.737
2zpa ACOtRNA(Met) cytidine acetyltransferase TmcA / 0.736
3d2m COAAmino-acid acetyltransferase / 0.732
4kub COAUncharacterized protein / 0.730
4r3k COAN-alpha-acetyltransferase 2.3.1 0.730
2fxf ACODiamine acetyltransferase 1 / 0.725
1pu9 COAHAT A1 / 0.721
4lx9 ACON-alpha-acetyltransferase 2.3.1 0.721
3gya COAGCN5-related N-acetyltransferase / 0.718
4zm6 ACON-acetyl-beta-D glucosaminidase / 0.718
2psw COAN-alpha-acetyltransferase 50 / 0.717
1qsm ACOHistone acetyltransferase HPA2 / 0.714
3vwe COAAlpha-tubulin N-acetyltransferase 1 / 0.713
3pgp ACOUncharacterized protein / 0.711
1mj9 COAHistone acetyltransferase ESA1 / 0.708
2jdd ACOProbable acetyltransferase / 0.706
1pua COAHAT A1 / 0.705
2bsw CAOProbable acetyltransferase / 0.705
1m4d COAAminoglycoside 2'-N-acetyltransferase 2.3.1 0.702
2qir COAAminoglycoside 6-N-acetyltransferase type Ib11 / 0.700
1cjw COTSerotonin N-acetyltransferase / 0.696
4jxr ACOAcetyltransferase / 0.696
2vxk COAGlucosamine 6-phosphate acetyltransferase, putative / 0.692
1v0c ACOAAC(6')-Ib / 0.691
4gs4 ACOAlpha-tubulin N-acetyltransferase 1 / 0.691
4u9y COAAlpha-tubulin N-acetyltransferase 1 / 0.689
1qsr ACOHAT A1 / 0.688
2b58 COADiamine acetyltransferase 1 / 0.688
2jdc CAOProbable acetyltransferase / 0.688
1tiq COASpermidine/spermine N(1)-acetyltransferase / 0.687
3k9u ACOSpermidine N(1)-acetyltransferase / 0.687
3gy9 COAGCN5-related N-acetyltransferase / 0.685
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.685
4ri1 ACOUDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 2.3.1.202 0.685
1j4j ACOAcetyltransferase 2.3.1 0.682
2x7b COAN-alpha-acetyltransferase 2.3.1 0.682
2c27 ACOMycothiol acetyltransferase 2.3.1.189 0.679
2ge3 ACOProbable acetyltransferase / 0.675
4r87 COASpermidine N(1)-acetyltransferase / 0.675
2ou2 ACOHistone acetyltransferase KAT5 / 0.671
4h6u ACOAlpha-tubulin N-acetyltransferase 1 / 0.671
1l0c COTSerotonin N-acetyltransferase / 0.670
1kux CA3Serotonin N-acetyltransferase / 0.668
3dr8 ACOL-methionine sulfoximine/L-methionine sulfone acetyltransferase / 0.668
1ghe ACOAcetyltransferase 2.3.1 0.665
1bo4 COAAminoglycoside-(3)-N-acetyltransferase / 0.662
2b3v ACODiamine acetyltransferase 1 / 0.661
3to6 LYS_CMCHistone acetyltransferase ESA1 / 0.659
1p0h COAMycothiol acetyltransferase 2.3.1.189 0.657
4if5 ACOAlpha-tubulin N-acetyltransferase 1 / 0.657
1kuy COTSerotonin N-acetyltransferase / 0.654
3sxn COAN-acetyltransferase Eis / 0.652