2.300 Å
X-ray
2010-05-06
Name: | NAD/NADP-dependent betaine aldehyde dehydrogenase |
---|---|
ID: | BETB_PSEAE |
AC: | Q9HTJ1 |
Organism: | Pseudomonas aeruginosa |
Reign: | Bacteria |
TaxID: | 208964 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
C | 100 % |
B-Factor: | 48.300 |
---|---|
Number of residues: | 32 |
Including | |
Standard Amino Acids: | 30 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 2 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.796 | 428.625 |
% Hydrophobic | % Polar |
---|---|
49.61 | 50.39 |
According to VolSite |
HET Code: | NDP |
---|---|
Formula: | C21H26N7O17P3 |
Molecular weight: | 741.389 g/mol |
DrugBank ID: | DB02338 |
Buried Surface Area: | 55.31 % |
Polar Surface area: | 404.9 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 22 |
H-Bond Donors: | 5 |
Rings: | 5 |
Aromatic rings: | 2 |
Anionic atoms: | 4 |
Cationic atoms: | 0 |
Rule of Five Violation: | 2 |
Rotatable Bonds: | 13 |
X | Y | Z |
---|---|---|
51.7685 | -63.7501 | 6.90626 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C1B | CG2 | ILE- 149 | 3.61 | 0 | Hydrophobic |
C4B | CG2 | ILE- 149 | 3.85 | 0 | Hydrophobic |
O3B | O | GLY- 150 | 2.88 | 151.64 | H-Bond (Ligand Donor) |
O2B | NZ | LYS- 176 | 3.39 | 157.43 | H-Bond (Protein Donor) |
O1X | NZ | LYS- 176 | 2.7 | 121.29 | H-Bond (Protein Donor) |
O1X | NZ | LYS- 176 | 2.7 | 0 | Ionic (Protein Cationic) |
C3B | CB | SER- 178 | 4.25 | 0 | Hydrophobic |
O3X | OG | SER- 178 | 3.49 | 135.85 | H-Bond (Protein Donor) |
O1X | N | GLU- 179 | 2.53 | 141.51 | H-Bond (Protein Donor) |
O2X | N | GLY- 209 | 3.26 | 175.17 | H-Bond (Protein Donor) |
C1B | CE1 | PHE- 227 | 3.94 | 0 | Hydrophobic |
C4B | CE1 | PHE- 227 | 3.63 | 0 | Hydrophobic |
O1A | N | GLY- 230 | 2.74 | 157.92 | H-Bond (Protein Donor) |
O2A | OG1 | THR- 233 | 3.26 | 158.27 | H-Bond (Protein Donor) |