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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4ng5NAJAlcohol dehydrogenase E chain1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4ng5NAJAlcohol dehydrogenase E chain1.1.1.11.000
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.821
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.671
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.650
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.632
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.621
4ng5PFBAlcohol dehydrogenase E chain1.1.1.10.607
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.590
1hldNADAlcohol dehydrogenase E chain1.1.1.10.557
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.549
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.543
5kjcPFBAlcohol dehydrogenase E chain1.1.1.10.531
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.527
1hetNADAlcohol dehydrogenase E chain1.1.1.10.525
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.524
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.513
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.509
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.509
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.509
5cdtNAJAlcohol dehydrogenase E chain1.1.1.10.506
1axgNADAlcohol dehydrogenase E chain1.1.1.10.505
1hszNADAlcohol dehydrogenase 1B1.1.1.10.505
5kj1PFBAlcohol dehydrogenase E chain1.1.1.10.505
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.503
5kj1NAJAlcohol dehydrogenase E chain1.1.1.10.501
1hf3NADAlcohol dehydrogenase E chain1.1.1.10.497
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.481
2fzeAPRAlcohol dehydrogenase class-31.1.1.10.478
1adcPADAlcohol dehydrogenase E chain1.1.1.10.475
1heuNADAlcohol dehydrogenase E chain1.1.1.10.475
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.471
1a71NADAlcohol dehydrogenase E chain1.1.1.10.469
5cdsNAJAlcohol dehydrogenase E chain1.1.1.10.463
1ma0NADAlcohol dehydrogenase class-31.1.1.10.459
4dl9NADS-(hydroxymethyl)glutathione dehydrogenase/0.455
1p0fNAPNADP-dependent alcohol dehydrogenase1.1.1.20.452
5cdsPFBAlcohol dehydrogenase E chain1.1.1.10.451
1e3lNADAlcohol dehydrogenase 41.1.1.10.447
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.445
5kjfNAJAlcohol dehydrogenase E chain1.1.1.10.440